RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 MREGQ8N565 214 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 GOLGA6L1Q8N7Z2 621 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 LMO3Q8TAP4 145 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 U2AF1L4Q8WU68 220 aaKnown RBP19.28■□□□□ 0.68
SCARB1-208ENST00000544327 TEPSINQ96N21 525 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 ACCSQ96QU6 501 aa19.28■□□□□ 0.68
SCARB1-208ENST00000544327 BHMG1C9JSJ3 638 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-208ENST00000544327 DDX39AO00148 427 aaKnown RBP19.27■□□□□ 0.68
SCARB1-208ENST00000544327 KCNK3O14649 394 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 PMM2O15305 246 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 TRIM49P0CI25 452 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 TRIM49CP0CI26 452 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 KRT13P13646 458 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 GALCP54803 685 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 KIF22Q14807 665 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 ZSCAN26Q16670 478 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-208ENST00000544327 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
SCARB1-208ENST00000544327 GOLGA8KD6RF30 607 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 CAPN2P17655 700 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 ZNF280AP59817 542 aaPredicted RBP19.26■□□□□ 0.67
SCARB1-208ENST00000544327 MRPS25P82663 173 aaKnown RBP19.26■□□□□ 0.67
SCARB1-208ENST00000544327 GTF2BQ00403 316 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 MTMR1Q13613 665 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 TNFAIP1Q13829 316 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 RASA3Q14644 834 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 CIAPIN1Q6FI81 312 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 C4orf19Q8IY42 314 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 KRT12Q99456 494 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 PPP1R9AQ9ULJ8 1098 aa19.26■□□□□ 0.67
SCARB1-208ENST00000544327 OPA1O60313 960 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 FDX1P10109 184 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 SF3B2Q13435 895 aaKnown RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 LEKR1Q6ZMV7 388 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 NT5DC3Q86UY8 548 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 RFFLQ8WZ73 363 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 HES6Q96HZ4 224 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.673e-8■■■□□ 16.5
SCARB1-208ENST00000544327 EPB41L5Q9HCM4 733 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 PGRMC1O00264 195 aaKnown RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 CTNND1O60716 968 aaKnown RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 ALAS1P13196 640 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 DNA2P51530 1060 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 JAK3P52333 1124 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 GUCY2DQ02846 1103 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 PGM5Q15124 567 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 PEX26Q7Z412 305 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 METTL13Q8N6R0 699 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 TSEN2Q8NCE0 465 aaKnown RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 RIN2Q8WYP3 895 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 IWS1Q96ST2 819 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 HINFPQ9BQA5 517 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 PDGFDQ9GZP0 370 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 RAVER2Q9HCJ3 691 aaKnown RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 ANKEF1Q9NU02 776 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 TTC7AQ9ULT0 858 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-208ENST00000544327 PARP14Q460N5 1801 aa19.25■□□□□ 0.67
SCARB1-208ENST00000544327 CCDC188H7C350 402 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 ASTN2O75129 1339 aaPredicted RBP19.24■□□□□ 0.67
SCARB1-208ENST00000544327 CARSP49589 748 aaKnown RBP19.24■□□□□ 0.67
SCARB1-208ENST00000544327 NCKAP1LP55160 1127 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 SPP2Q13103 211 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 EPC2Q52LR7 807 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 PHLDB3Q6NSJ2 640 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 XRRA1Q6P2D8 792 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 RDM1Q8NG50 284 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 WHAMMQ8TF30 809 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 SLC16A10Q8TF71 515 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 CASKIN2Q8WXE0 1202 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 PKD2L1Q9P0L9 805 aa19.24■□□□□ 0.67
SCARB1-208ENST00000544327 DIS3Q9Y2L1 958 aaKnown RBP19.24■□□□□ 0.67
SCARB1-208ENST00000544327 RAD51CO43502 376 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 SHOX2O60902 331 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-208ENST00000544327 HSF2BPO75031 334 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 IVLP07476 585 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 YWHABP31946 246 aaKnown RBP19.23■□□□□ 0.67
SCARB1-208ENST00000544327 SFNP31947 248 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 VAMP7P51809 220 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 PPATQ06203 517 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 CETN1Q12798 172 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 PPFIA1Q13136 1202 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 TCEAL1Q15170 157 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 DNAAF5Q86Y56 855 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 GLYCTKQ8IVS8 523 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 HVCN1Q96D96 273 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 TAAR1Q96RJ0 339 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 CWC15Q9P013 229 aaKnown RBP19.23■□□□□ 0.67
SCARB1-208ENST00000544327 EMSYQ7Z589 1322 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 CEP104O60308 925 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 RPS12P25398 132 aaKnown RBP19.23■□□□□ 0.67
SCARB1-208ENST00000544327 HADHBP55084 474 aaKnown RBP19.23■□□□□ 0.67
SCARB1-208ENST00000544327 PSMC5P62195 406 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 RPS6P62753 249 aaKnown RBP19.23■□□□□ 0.67
SCARB1-208ENST00000544327 C1orf220Q5T0J3 134 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 XXYLT1Q8NBI6 393 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 FAM76AQ8TAV0 307 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 ZBTB9Q96C00 473 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 ISCUQ9H1K1 167 aa19.23■□□□□ 0.67
SCARB1-208ENST00000544327 AMFRQ9UKV5 643 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms