RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 PDE6CP51160 858 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 SNRPFP62306 86 aaKnown RBP8.46□□□□□ -1.06
LRP6-206ENST00000543091 BFSP1Q12934 665 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 PPP2R5CQ13362 524 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 GRIK4Q16099 956 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 DUSP28Q4G0W2 176 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 DCUN1D2Q6PH85 259 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 RRAGAQ7L523 313 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 GPD1LQ8N335 351 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 ZNF560Q96MR9 790 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 RUFY1Q96T51 708 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 CRACR2AQ9BSW2 395 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 ST7Q9NRC1 585 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 IMPACTQ9P2X3 320 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 NXF1Q9UBU9 619 aaKnown RBP8.46□□□□□ -1.06
LRP6-206ENST00000543091 SRRDQ9UH36 339 aa8.46□□□□□ -1.06
LRP6-206ENST00000543091 DBR1Q9UK59 544 aaKnown RBP8.46□□□□□ -1.06
LRP6-206ENST00000543091 ZNF214Q9UL59 606 aaPredicted RBP8.46□□□□□ -1.06
LRP6-206ENST00000543091 PDXKO00764 312 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 ZNF286BP0CG31 522 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 TMEM62Q0P6H9 643 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 PPP1R2P3Q6NXS1 205 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 CYP26C1Q6V0L0 522 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 ZNF354CQ86Y25 554 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 TMTC1Q8IUR5 882 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 POLD4Q9HCU8 107 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 NRBP1Q9UHY1 535 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 SYNGAP1Q96PV0 1343 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 SHANK3Q9BYB0 1731 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 UQCRHLA0A096LP55 91 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 HUS1O60921 280 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 LGALS2P05162 132 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 UQCRHP07919 91 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 ITGA4P13612 1032 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 ELNP15502 786 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 DNA2P51530 1060 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 PPP1R9BQ96SB3 815 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 TMEM39AQ9NV64 488 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 RIPK3Q9Y572 518 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 PCDHB4Q9Y5E5 795 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 MROH7Q68CQ1 1323 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 SPATA31C2B4DYI2 1134 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 PQBP1O60828 265 aaKnown RBP8.45□□□□□ -1.06
LRP6-206ENST00000543091 NAMPTP43490 491 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 TYW1BQ6NUM6 668 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 CYP2W1Q8TAV3 490 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 EEF2KMTQ96G04 330 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 INPP4AQ96PE3 977 aaPredicted RBP8.45□□□□□ -1.06
LRP6-206ENST00000543091 DEFB118Q96PH6 123 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 BAG1Q99933 345 aaPredicted RBP8.45□□□□□ -1.06
LRP6-206ENST00000543091 ACBD3Q9H3P7 528 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 SLC38A7Q9NVC3 462 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 MORF4L1Q9UBU8 362 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.45□□□□□ -1.06
LRP6-206ENST00000543091 CYP3A7-CYP3A51PA0A087WV96 503 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 CYP3A7P24462 503 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 NMT1P30419 496 aaKnown RBP8.45□□□□□ -1.06
LRP6-206ENST00000543091 CASQ1P31415 396 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 ZNF75DP51815 510 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 PRAMEF19Q5SWL8 479 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 ATF7IP2Q5U623 682 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 CTU1Q7Z7A3 348 aaKnown RBP8.45□□□□□ -1.06
LRP6-206ENST00000543091 OR8K1Q8NGG5 319 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 KIF18AQ8NI77 898 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 MAML3Q96JK9 1138 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 TSGA10Q9BZW7 698 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 GOLPH3LQ9H4A5 285 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 SETD4Q9NVD3 440 aa8.45□□□□□ -1.06
LRP6-206ENST00000543091 RBAKQ9NYW8 714 aaPredicted RBP8.45□□□□□ -1.06
LRP6-206ENST00000543091 CCDC88AQ3V6T2 1871 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 DYNC1I1O14576 645 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 DUSP11O75319 330 aaKnown RBP8.44□□□□□ -1.06
LRP6-206ENST00000543091 CLCN3P51790 818 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 RRP1BQ14684 758 aaKnown RBP8.44□□□□□ -1.06
LRP6-206ENST00000543091 PTPAQ15257 358 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 DUOXA2Q1HG44 320 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 DCAF4L1Q3SXM0 396 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 SELENOOQ9BVL4 669 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 ZNF831Q5JPB2 1677 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 SNED1Q8TER0 1413 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 NRCAMQ92823 1304 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 GOLGA6L10A0A0M3HER8 536 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 MYMKA6NI61 221 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 EIF3DO15371 548 aaKnown RBP eCLIP8.44□□□□□ -1.065e-6■□□□□ 8.8
LRP6-206ENST00000543091 MED7O43513 233 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 MED24O75448 989 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 PGK1P00558 417 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 BEX3Q00994 111 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 FUT2Q10981 343 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 RINT1Q6NUQ1 792 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 NFRKBQ6P4R8 1299 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 CXCL17Q6UXB2 119 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 SENP6Q9GZR1 1112 aaPredicted RBP8.44□□□□□ -1.06
LRP6-206ENST00000543091 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 COL5A3P25940 1745 aaPredicted RBP8.44□□□□□ -1.06
LRP6-206ENST00000543091 SEPT4O43236 478 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 FERP16591 822 aa8.44□□□□□ -1.06
LRP6-206ENST00000543091 TOB1P50616 345 aaPredicted RBP8.44□□□□□ -1.06
LRP6-206ENST00000543091 POLR2FP61218 127 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms