RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ADORA2AP29274 412 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ADSSP30520 456 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 IL12RB1P42701 662 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ASPAP45381 313 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 DEFB103AP81534 67 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 FGD1P98174 961 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 DNM1Q05193 864 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ITGA7Q13683 1181 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 SIM2Q14190 667 aaPredicted RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 POU4F3Q15319 338 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 SF3A2Q15428 464 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 MTHFSDQ2M296 383 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 PROSER3Q2NL68 480 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF648Q5T619 568 aaPredicted RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 LBX2Q6XYB7 198 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 RUFY4Q6ZNE9 571 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF765Q7L2R6 523 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 DYMQ7RTS9 669 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 GPR155Q7Z3F1 870 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 TDRD5Q8NAT2 981 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 PIP4K2CQ8TBX8 421 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 HELQQ8TDG4 1101 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 CLP1Q92989 425 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 NXPE3Q969Y0 559 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 FAM89AQ96GI7 184 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 HRASLS5Q96KN8 279 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 NECTIN4Q96NY8 510 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 KLHL5Q96PQ7 755 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 CLEC4MQ9H2X3 399 aaPredicted RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ATXN3LQ9H3M9 355 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 PRORYQ9H606 182 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 JADE2Q9NQC1 790 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 USP40Q9NVE5 1235 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 TMOD4Q9NZQ9 345 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 TMEM63CQ9P1W3 806 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZC3H7BQ9UGR2 993 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 FAM184BQ9ULE4 1060 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 DUSP12Q9UNI6 340 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 MINPP1Q9UNW1 487 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 SYNRGQ9UMZ2 1314 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 ARAP2Q8WZ64 1704 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 LOC285556D6RIA3 1793 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 UTP20O75691 2785 aaKnown RBP2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 NBPF19A0A087WUL8 3843 aa2.81□□□□□ -1.96
TRAV1-1-201ENST00000542354 JMJD1CQ15652 2540 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 FAM170BA6NMN3 283 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 GNAT3A8MTJ3 354 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 C5orf67F2Z3F1 127 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 GRM6O15303 877 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 DUSP11O75319 330 aaKnown RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 FAM13AO94988 1023 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 TSPAN15O95858 294 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 CYP2E1P05181 493 aaPredicted RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 NFICP08651 508 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 ESRRAP11474 423 aaPredicted RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 HOXB8P17481 243 aaPredicted RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 MAGEA9P43362 315 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 AFMP43652 599 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 KCNJ4P48050 445 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 NRIP1P48552 1158 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 HTRA4P83105 476 aaPredicted RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 HDLBPQ00341 1268 aaKnown RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 UBE4AQ14139 1066 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 NAA30Q147X3 362 aaPredicted RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 NONOQ15233 471 aaKnown RBP eCLIP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 KCNMB1Q16558 191 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 OCLNQ16625 522 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 LRRFIP1Q32MZ4 808 aaKnown RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 CES5AQ6NT32 575 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 CDPF1Q6NVV7 123 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 CNKSR3Q6P9H4 555 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 SLC23A3Q6PIS1 610 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 NFXL1Q6ZNB6 911 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 COPS6Q7L5N1 327 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 RBM23Q86U06 439 aaKnown RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZSWIM9Q86XI8 627 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 FMNL3Q8IVF7 1028 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 C1orf127Q8N9H9 656 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 MDM1Q8TC05 714 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 ASB11Q8WXH4 323 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 EDEM1Q92611 657 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 MOCOSQ96EN8 888 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 SHDQ96IW2 340 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 FCRL3Q96P31 734 aaPredicted RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 YME1L1Q96TA2 773 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 MYD88Q99836 296 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZKSCAN3Q9BRR0 538 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 SGPP1Q9BX95 441 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 SAP130Q9H0E3 1048 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 S1PR5Q9H228 398 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 SEMA6CQ9H3T2 930 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 SLC32A1Q9H598 525 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 TLE6Q9H808 572 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 GPR108Q9NPR9 543 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 CYP26B1Q9NR63 512 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 DKK4Q9UBT3 224 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 CA14Q9ULX7 337 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 CNPY2Q9Y2B0 182 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 USTQ9Y2C2 406 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms