RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DHX8Q14562 1220 aaKnown RBP13.64□□□□□ -0.23
DDX55-206ENST00000539934 SLC39A14Q15043 492 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
DDX55-206ENST00000539934 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 C10orf76Q5T2E6 689 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 CDC42EP5Q6NZY7 148 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 NEDD1Q8NHV4 660 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 FAM71BQ8TC56 605 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
DDX55-206ENST00000539934 GTF3C4Q9UKN8 822 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 HTR3EA5X5Y0 456 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 SMIM24O75264 130 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
DDX55-206ENST00000539934 NR5A1Q13285 461 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 MKRN4PQ13434 485 aaPredicted RBP13.64□□□□□ -0.23
DDX55-206ENST00000539934 APOBEC3HQ6NTF7 200 aaKnown RBP13.64□□□□□ -0.23
DDX55-206ENST00000539934 MIGA2Q7L4E1 593 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 MSANTD4Q8NCY6 345 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
DDX55-206ENST00000539934 MAIP1Q8WWC4 291 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 ZNF653Q96CK0 615 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 TMEM47Q9BQJ4 181 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 EBF2Q9HAK2 575 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 SFMBT1Q9UHJ3 866 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 MKL2Q9ULH7 1088 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 SHOX2O60902 331 aaPredicted RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 RBP3P10745 1247 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 SCG2P13521 617 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 KRT2P35908 639 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 ACTN3Q08043 901 aaPredicted RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 ITGA7Q13683 1181 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 KIF22Q14807 665 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 GRM4Q14833 912 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 BCL2A1Q16548 175 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 RILPL1Q5EBL4 403 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 PPP1R15BQ5SWA1 713 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 TRIM47Q96LD4 638 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 OSBPL5Q9H0X9 879 aaPredicted RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 SEMA4AQ9H3S1 761 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 CLK4Q9HAZ1 481 aaKnown RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 KRT82Q9NSB4 513 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 HOOK1Q9UJC3 728 aaKnown RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 R3HDM2Q9Y2K5 976 aaKnown RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 H0Y3Z8 333 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 HOXA2O43364 376 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 PPP6R2O75170 966 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 HLA-DOAP06340 250 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 TSPAN7P41732 249 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 NEPROQ6NW34 567 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 RBM43Q6ZSC3 357 aaKnown RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 MAATS1Q7Z4T9 603 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 ZNF75CPQ92670 426 aaPredicted RBP13.63□□□□□ -0.23
DDX55-206ENST00000539934 ZDHHC15Q96MV8 337 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 CCT7Q99832 543 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 PHF20Q9BVI0 1012 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 RNF208Q9H0X6 261 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
DDX55-206ENST00000539934 LUC7L3O95232 432 aaKnown RBP13.62□□□□□ -0.23
DDX55-206ENST00000539934 PTGS1P23219 599 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 HALP42357 657 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 GSTM4Q03013 218 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 TYRO3Q06418 890 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 TNFAIP1Q13829 316 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.62□□□□□ -0.23
DDX55-206ENST00000539934 GRAMD2AQ8IUY3 354 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 TMEM151BQ8IW70 566 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 APPL2Q8NEU8 664 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 ENGASEQ8NFI3 743 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 LRRIQ3A6PVS8 624 aaPredicted RBP13.62□□□□□ -0.23
DDX55-206ENST00000539934 WDR46O15213 610 aaKnown RBP13.62□□□□□ -0.23
DDX55-206ENST00000539934 CYTH3O43739 400 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 NPTXRO95502 500 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 ATP4AP20648 1035 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 PTPAQ15257 358 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 IRGCQ6NXR0 463 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 RNF10Q8N5U6 811 aaKnown RBP13.62□□□□□ -0.23
DDX55-206ENST00000539934 CCDC110Q8TBZ0 833 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 RAET1EQ8TD07 263 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 CEP95Q96GE4 821 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 MRIQ9BWK5 157 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 VCPKMTQ9H867 229 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 CABP5Q9NP86 173 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 DISC1Q9NRI5 854 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 PCMTD2Q9NV79 361 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 MAD2L2Q9UI95 211 aa13.62□□□□□ -0.23
DDX55-206ENST00000539934 TOP1P11387 765 aaKnown RBP13.61□□□□□ -0.23
DDX55-206ENST00000539934 CCL5P13501 91 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 OSBPP22059 807 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 ALDH3A1P30838 453 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
DDX55-206ENST00000539934 NDUFA8P51970 172 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms