RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ANP32BQ92688 251 aaKnown RBP10.52□□□□□ -0.73
VPS26B-207ENST00000532160 MBOAT7Q96N66 472 aa10.52□□□□□ -0.73
VPS26B-207ENST00000532160 USP28Q96RU2 1077 aa10.52□□□□□ -0.73
VPS26B-207ENST00000532160 PPP1R16BQ96T49 567 aa10.52□□□□□ -0.73
VPS26B-207ENST00000532160 ZNF577Q9BSK1 485 aa10.52□□□□□ -0.73
VPS26B-207ENST00000532160 ZSCAN16Q9H4T2 348 aaPredicted RBP10.52□□□□□ -0.73
VPS26B-207ENST00000532160 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
VPS26B-207ENST00000532160 CLEC1BQ9P126 229 aa10.52□□□□□ -0.73
VPS26B-207ENST00000532160 NOC2LQ9Y3T9 749 aaKnown RBP10.52□□□□□ -0.73
VPS26B-207ENST00000532160 IPO5O00410 1097 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 DHX15O43143 795 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 CHMP2AO43633 222 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 MARCH6O60337 910 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 HBP1O60381 514 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 EYA4O95677 639 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 GCFC2P16383 781 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 ATP4AP20648 1035 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 TXKP42681 527 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 NRIP1P48552 1158 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 TRAPPC10P48553 1259 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 SLC26A2P50443 739 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 SETQ01105 290 aaPredicted RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 DNM1Q05193 864 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 PTGDRQ13258 359 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 CALCRLQ16602 461 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 NAALADL2Q58DX5 795 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 FAM102BQ5T8I3 360 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 PDXDC2PQ6P474 469 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 NIPA1Q7RTP0 329 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 RBM23Q86U06 439 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 ALYREFQ86V81 257 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 RNF135Q8IUD6 432 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 NME8Q8N427 588 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 EFHBQ8N7U6 833 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 SMRP1Q8NCR6 262 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 ETNPPLQ8TBG4 499 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 HAS1Q92839 578 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 TNPO1Q92973 898 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 POP1Q99575 1024 aaKnown RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 LRFN2Q9ULH4 789 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 BARX2Q9UMQ3 279 aaPredicted RBP10.51□□□□□ -0.73
VPS26B-207ENST00000532160 USP34Q70CQ2 3546 aa10.51□□□□□ -0.73
VPS26B-207ENST00000532160 DENND3A2RUS2 1198 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 TBKBP1A7MCY6 615 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 GAS7O60861 476 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 RPS6KA5O75582 802 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 C22orf31O95567 290 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 NCLP19338 710 aaKnown RBP10.5□□□□□ -0.73
VPS26B-207ENST00000532160 RBM10P98175 930 aaKnown RBP10.5□□□□□ -0.73
VPS26B-207ENST00000532160 KIZQ2M2Z5 673 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 HERC4Q5GLZ8 1057 aaPredicted RBP10.5□□□□□ -0.73
VPS26B-207ENST00000532160 LRCH2Q5VUJ6 765 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 FAM160B1Q5W0V3 765 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 SWSAP1Q6NVH7 229 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 FAM228AQ86W67 206 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 C4orf32Q8N8J7 132 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 VN1R2Q8NFZ6 395 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 SLC5A5Q92911 643 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 PPP2R3CQ969Q6 453 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 FBXL18Q96ME1 805 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 OSMRQ99650 979 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 NAP1L4Q99733 375 aaKnown RBP10.5□□□□□ -0.73
VPS26B-207ENST00000532160 ADAM2Q99965 735 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 KCNMB3Q9NPA1 279 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 ZNF302Q9NR11 478 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 ST3GAL5Q9UNP4 418 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 PCDHB7Q9Y5E2 793 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 COL1A2P08123 1366 aa10.5□□□□□ -0.73
VPS26B-207ENST00000532160 C9IYK1 514 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 PER2O15055 1255 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 GPR32O75388 356 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 PSMD10O75832 226 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 VTNP04004 478 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 OR52Z1P0C646 297 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 FGFR1P11362 822 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 MARCKSP29966 332 aaPredicted RBP10.49□□□□□ -0.73
VPS26B-207ENST00000532160 TECP42680 631 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 NHLH1Q02575 133 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 GRIN1Q05586 938 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 COASYQ13057 564 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 PTPAQ15257 358 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 IL17AQ16552 155 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 KLHL40Q2TBA0 621 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 TPRNQ4KMQ1 711 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 ZNF484Q5JVG2 852 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 SPOUT1Q5T280 376 aaKnown RBP10.49□□□□□ -0.73
VPS26B-207ENST00000532160 SLC24A5Q71RS6 500 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 TRMT1LQ7Z2T5 733 aaKnown RBP10.49□□□□□ -0.73
VPS26B-207ENST00000532160 CKAP2LQ8IYA6 745 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 ZNF396Q96N95 335 aaPredicted RBP10.49□□□□□ -0.73
VPS26B-207ENST00000532160 MTMR9Q96QG7 549 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 TEKT3Q9BXF9 490 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 UNC45AQ9H3U1 944 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 TTC12Q9H892 705 aaPredicted RBP10.49□□□□□ -0.73
VPS26B-207ENST00000532160 GDPD2Q9HCC8 539 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 RGS18Q9NS28 235 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 USP15Q9Y4E8 981 aaPredicted RBP10.49□□□□□ -0.73
VPS26B-207ENST00000532160 CACNA1HO95180 2353 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 MYO15AQ9UKN7 3530 aa10.49□□□□□ -0.73
VPS26B-207ENST00000532160 DMDP11532 3685 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms