RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 FAM114A2Q9NRY5 505 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 TAS2R14Q9NYV8 317 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 UBE4BO95155 1302 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 GAS7O60861 476 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 CCDC172P0C7W6 258 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 TNFAIP3P21580 790 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 FKBP1AP62942 108 aaKnown RBP21.11■□□□□ 0.97
PCF11-203ENST00000530304 PRPF4BQ13523 1007 aaKnown RBP21.11■□□□□ 0.97
PCF11-203ENST00000530304 PPP2R5AQ15172 486 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 ARHGAP44Q17R89 818 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 OTUD6BQ8N6M0 293 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 MASTLQ96GX5 879 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 NACC1Q96RE7 527 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 SEPT11Q9NVA2 429 aaKnown RBP21.11■□□□□ 0.97
PCF11-203ENST00000530304 SERPINA10Q9UK55 444 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 DIS3Q9Y2L1 958 aaKnown RBP21.11■□□□□ 0.97
PCF11-203ENST00000530304 SRRM3A6NNA2 597 aaPredicted RBP21.1■□□□□ 0.97
PCF11-203ENST00000530304 PDE6BP35913 854 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 ECE1P42892 770 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 DHX9Q08211 1270 aaKnown RBP21.1■□□□□ 0.97
PCF11-203ENST00000530304 PHLDB3Q6NSJ2 640 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 STXBP4Q6ZWJ1 553 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 RDH13Q8NBN7 331 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 TRIM51Q9BSJ1 452 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 TRIM31Q9BZY9 425 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 MYL7Q01449 175 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 MICALCLQ6ZW33 695 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 PALB2Q86YC2 1186 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 SLC12A6Q9UHW9 1150 aa21.1■□□□□ 0.97
PCF11-203ENST00000530304 ECE2O60344 883 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 PTENP60484 403 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 ODF2Q5BJF6 829 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 KIAA1755Q5JYT7 1200 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 ADAT2Q7Z6V5 191 aaKnown RBP21.09■□□□□ 0.97
PCF11-203ENST00000530304 NLGN1Q8N2Q7 840 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 ZNF622Q969S3 477 aaKnown RBP eCLIP21.09■□□□□ 0.971e-7■■□□□ 13.6
PCF11-203ENST00000530304 CARD9Q9H257 536 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 ODF2LQ9ULJ1 636 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 COG5Q9UP83 839 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 SCN9AQ15858 1988 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 FOXN3O00409 490 aaPredicted RBP21.09■□□□□ 0.97
PCF11-203ENST00000530304 EXOC3O60645 756 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 BFSP1Q12934 665 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 CCDC174Q6PII3 467 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 FMNL3Q8IVF7 1028 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 SPATA31A6Q5VVP1 1343 aa21.09■□□□□ 0.97
PCF11-203ENST00000530304 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
PCF11-203ENST00000530304 ANKRD62A6NC57 917 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 LRRN2O75325 713 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 AGBL2Q5U5Z8 902 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 FBXW10Q5XX13 1052 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 ICE2Q659A1 982 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 BANK1Q8NDB2 785 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 ATP8B4Q8TF62 1192 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 HOOK2Q96ED9 719 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 CSRNP1Q96S65 589 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 RAB17Q9H0T7 212 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 UNC45AQ9H3U1 944 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 KCND2Q9NZV8 630 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 NOVA2Q9UNW9 492 aaKnown RBP21.08■□□□□ 0.97
PCF11-203ENST00000530304 ATRNL1Q5VV63 1379 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 TRIM37O94972 964 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 TMOD1P28289 359 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 COPB2P35606 906 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 ZNF211Q13398 564 aaPredicted RBP21.08■□□□□ 0.97
PCF11-203ENST00000530304 CEP55Q53EZ4 464 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 YTHDF3Q7Z739 585 aaKnown RBP21.08■□□□□ 0.97
PCF11-203ENST00000530304 SYCP3Q8IZU3 236 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 ZNF577Q9BSK1 485 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 ERVK-5Q9HDB9 667 aa21.08■□□□□ 0.97
PCF11-203ENST00000530304 ARP10275 920 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 MUTP22033 750 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 PPP2R2AP63151 447 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 DR1Q01658 176 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 KIF22Q14807 665 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 MEX3CQ5U5Q3 659 aaKnown RBP21.08■□□□□ 0.96
PCF11-203ENST00000530304 LMO3Q8TAP4 145 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 NAP1L3Q99457 506 aaPredicted RBP21.08■□□□□ 0.96
PCF11-203ENST00000530304 FMO2Q99518 471 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 CNOT8Q9UFF9 292 aaKnown RBP21.08■□□□□ 0.96
PCF11-203ENST00000530304 CAPN7Q9Y6W3 813 aa21.08■□□□□ 0.96
PCF11-203ENST00000530304 GMNCA6NCL1 334 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 ENTPD3O75355 529 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 TRAF1Q13077 416 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 MMS22LQ6ZRQ5 1243 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 AGPAT1Q99943 283 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 ATP8A1Q9Y2Q0 1164 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 RBBP6Q7Z6E9 1792 aaKnown RBP21.07■□□□□ 0.96
PCF11-203ENST00000530304 DCDC2CA8MYV0 355 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 SLC9A9Q8IVB4 645 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 ACER1Q8TDN7 264 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 ALG3Q92685 438 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 LXNQ9BS40 222 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 STRA6Q9BX79 667 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 WDR11Q9BZH6 1224 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 LRRC4CQ9HCJ2 640 aa21.07■□□□□ 0.96
PCF11-203ENST00000530304 COL11A2P13942 1736 aaPredicted RBP21.06■□□□□ 0.96
PCF11-203ENST00000530304 GOLGA6L10A0A0M3HER8 536 aa21.06■□□□□ 0.96
PCF11-203ENST00000530304 HIP1RO75146 1068 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms