RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	CYB5RL	Q6IPT4	315 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	TMC6	Q7Z403	805 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	CATIP	Q7Z7H3	387 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	IRF2BP1	Q8IU81	584 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	CERS3	Q8IU89	383 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.09	□□□□□ -1.59
RDX-208	ENST00000530085	PRR18	Q8N4B5	295 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
RDX-208	ENST00000530085	SVIP	Q8NHG7	77 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	FBXO41	Q8TF61	875 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	GAB3	Q8WWW8	586 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	GTPBP4	Q9BZE4	634 aa	Known RBP	5.09	□□□□□ -1.59
RDX-208	ENST00000530085	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.09	□□□□□ -1.59
RDX-208	ENST00000530085	RNF38	Q9H0F5	515 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	MTG2	Q9H4K7	406 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	ZNF552	Q9H707	407 aa	Predicted RBP	5.09	□□□□□ -1.59
RDX-208	ENST00000530085	MAN1C1	Q9NR34	630 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	USP18	Q9UMW8	372 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	CDY2A	Q9Y6F7	541 aa		5.09	□□□□□ -1.59
RDX-208	ENST00000530085	IRS2	Q9Y4H2	1338 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	LOC102724159	A0A0B4J2E5	919 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	OPHN1	O60890	802 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	GLI1	P08151	1106 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	CELA3B	P08861	270 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	FBLN1	P23142	703 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	APEX1	P27695	318 aa	Known RBP	5.08	□□□□□ -1.6
RDX-208	ENST00000530085	VIPR1	P32241	457 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	GPR15	P49685	360 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	PWP2	Q15269	919 aa	Known RBP	5.08	□□□□□ -1.6
RDX-208	ENST00000530085	SKIDA1	Q1XH10	827 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	UAP1L1	Q3KQV9	507 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	OLFML2B	Q68BL8	750 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	TMC5	Q6UXY8	1006 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	USP45	Q70EL2	814 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	CHST15	Q7LFX5	561 aa	Predicted RBP	5.08	□□□□□ -1.6
RDX-208	ENST00000530085	SAMD3	Q8N6K7	520 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	DTX3	Q8N9I9	347 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	PJA1	Q8NG27	643 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	WDR48	Q8TAF3	677 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	DIS3L	Q8TF46	1054 aa	Known RBP	5.08	□□□□□ -1.6
RDX-208	ENST00000530085	FATE1	Q969F0	183 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	ACO2	Q99798	780 aa	Known RBP	5.08	□□□□□ -1.6
RDX-208	ENST00000530085	ACE2	Q9BYF1	805 aa	Predicted RBP	5.08	□□□□□ -1.6
RDX-208	ENST00000530085	OR10A5	Q9H207	317 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	DDX21	Q9NR30	783 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
RDX-208	ENST00000530085	DLL4	Q9NR61	685 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	ARHGAP20	Q9P2F6	1191 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	FTSJ1	Q9UET6	329 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	DNM3	Q9UQ16	869 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	PCDHB6	Q9Y5E3	794 aa		5.08	□□□□□ -1.6
RDX-208	ENST00000530085	IL18BP	O95998	194 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	C8B	P07358	591 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	FXR1	P51114	621 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
RDX-208	ENST00000530085	SLC16A1	P53985	500 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	CCT2	P78371	535 aa	Known RBP	5.07	□□□□□ -1.6
RDX-208	ENST00000530085	PPARA	Q07869	468 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	NFATC3	Q12968	1075 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	MALL	Q13021	153 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	OS9	Q13438	667 aa	Predicted RBP	5.07	□□□□□ -1.6
RDX-208	ENST00000530085	GALE	Q14376	348 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	STIL	Q15468	1287 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	ADRM1	Q16186	407 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	CCDC178	Q5BJE1	867 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	GAREM2	Q75VX8	874 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	CDYL2	Q8N8U2	506 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	MORC4	Q8TE76	937 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	TTC17	Q96AE7	1141 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	C1GALT1C1	Q96EU7	318 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	MVB12A	Q96EY5	273 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	TMEM209	Q96SK2	561 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	MAP3K14	Q99558	947 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	NOL10	Q9BSC4	688 aa	Known RBP	5.07	□□□□□ -1.6
RDX-208	ENST00000530085	MYH16	Q9H6N6	1097 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	KCMF1	Q9P0J7	381 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	EVL	Q9UI08	416 aa	Predicted RBP	5.07	□□□□□ -1.6
RDX-208	ENST00000530085	LIMCH1	Q9UPQ0	1083 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	PTPN22	Q9Y2R2	807 aa		5.07	□□□□□ -1.6
RDX-208	ENST00000530085	HTRA2	O43464	458 aa	Predicted RBP	5.06	□□□□□ -1.6
RDX-208	ENST00000530085	CUTA	O60888	179 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	MAF	O75444	373 aa	Predicted RBP	5.06	□□□□□ -1.6
RDX-208	ENST00000530085	ATF2	P15336	505 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	PHKG2	P15735	406 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	EDNRB	P24530	442 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	WAS	P42768	502 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	GLRB	P48167	497 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	USP14	P54578	494 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	IL13RA1	P78552	427 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	SRSF3	P84103	164 aa	Known RBP	5.06	□□□□□ -1.6
RDX-208	ENST00000530085	CD83	Q01151	205 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	SAFB	Q15424	915 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
RDX-208	ENST00000530085	TARBP2	Q15633	366 aa	Known RBP	5.06	□□□□□ -1.6
RDX-208	ENST00000530085	KCNMB1	Q16558	191 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	COBLL1	Q53SF7	1204 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	KANK2	Q63ZY3	851 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	DPP8	Q6V1X1	898 aa	Predicted RBP	5.06	□□□□□ -1.6
RDX-208	ENST00000530085	CXXC5	Q7LFL8	322 aa	Known RBP	5.06	□□□□□ -1.6
RDX-208	ENST00000530085	BMP8A	Q7Z5Y6	402 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	LDHD	Q86WU2	507 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	ZSWIM9	Q86XI8	627 aa		5.06	□□□□□ -1.6
RDX-208	ENST00000530085	GRAMD1C	Q8IYS0	662 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms