RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 KBTBD4Q9NVX7 518 aa16.01■□□□□ 0.15
NR1H3-231ENST00000529540 ERAP1Q9NZ08 941 aa16.01■□□□□ 0.15
NR1H3-231ENST00000529540 DDX20Q9UHI6 824 aaKnown RBP16.01■□□□□ 0.15
NR1H3-231ENST00000529540 PUF60Q9UHX1 559 aaKnown RBP16.01■□□□□ 0.15
NR1H3-231ENST00000529540 LOXHD1Q8IVV2 1947 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 CTAGE15A4D2H0 777 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 SORBS3O60504 671 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 IVLP07476 585 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 CTAGE8P0CG41 777 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 YWHABP31946 246 aaKnown RBP16■□□□□ 0.15
NR1H3-231ENST00000529540 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
NR1H3-231ENST00000529540 AMPD2Q01433 879 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 NAALADL2Q58DX5 795 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 CTAGE6Q86UF2 777 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 CTAGE4Q8IX94 777 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 EXOC8Q8IYI6 725 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 FAM71BQ8TC56 605 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 KATNAL1Q9BW62 490 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
NR1H3-231ENST00000529540 ACBD3Q9H3P7 528 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 BCAS3Q9H6U6 928 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 ABCB6Q9NP58 842 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 RWDD2AQ9UIY3 292 aa16■□□□□ 0.15
NR1H3-231ENST00000529540 A0A0U1RQJ8 604 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 STX17P56962 302 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 PRKCEQ02156 737 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 KRT31Q15323 416 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 FSCN1Q16658 493 aaKnown RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 WDR93Q6P2C0 686 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 SYT2Q8N9I0 419 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 ATRIPQ8WXE1 791 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 PLIN2Q99541 437 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 XPNPEP3Q9NQH7 507 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 ABHD10Q9NUJ1 306 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 BLOC1S4Q9NUP1 217 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 ADCY6O43306 1168 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 OATP04181 439 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 LGALS2P05162 132 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 PLA2G4BP0C869 781 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 CST5P28325 142 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 CCND3P30281 292 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 AFMP43652 599 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 LMAN1P49257 510 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 TRIM32Q13049 653 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 ECM1Q16610 540 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 GJC2Q5T442 439 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 KLHL10Q6JEL2 608 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 PCSK9Q8NBP7 692 aaKnown RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 ACRBPQ8NEB7 543 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 CPLX3Q8WVH0 158 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 CCDC47Q96A33 483 aaKnown RBP15.99■□□□□ 0.15
NR1H3-231ENST00000529540 TIPINQ9BVW5 301 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
NR1H3-231ENST00000529540 PCNTO95613 3336 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 DOCK5Q9H7D0 1870 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 ARHGEF35A5YM69 484 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 GTPBP6O43824 516 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-231ENST00000529540 C6orf222P0C671 652 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-231ENST00000529540 TMEM63BQ5T3F8 832 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 CNNM4Q6P4Q7 775 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 LEKR1Q6ZMV7 388 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 RNF180Q86T96 592 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 BHMT2Q9H2M3 363 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 VIPAS39Q9H9C1 493 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 MED4Q9NPJ6 270 aa15.98■□□□□ 0.15
NR1H3-231ENST00000529540 E9PMD0 336 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 H3BRB1 525 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 HBP1O60381 514 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 RARRES1P49788 294 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 VSNL1P62760 191 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 CASP8Q14790 479 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 UGCGQ16739 394 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 ZNF662Q6ZS27 426 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 ANKRD20A12PQ8NF67 263 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 ATP8B4Q8TF62 1192 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 PCYT2Q99447 389 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 JPH2Q9BR39 696 aaPredicted RBP15.97■□□□□ 0.15
NR1H3-231ENST00000529540 NIFKQ9BYG3 293 aaKnown RBP15.97■□□□□ 0.15
NR1H3-231ENST00000529540 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.97■□□□□ 0.15
NR1H3-231ENST00000529540 TUT1Q9H6E5 874 aaKnown RBP15.97■□□□□ 0.15
NR1H3-231ENST00000529540 VPS18Q9P253 973 aa15.97■□□□□ 0.15
NR1H3-231ENST00000529540 WRAP73Q9P2S5 460 aaPredicted RBP15.97■□□□□ 0.15
NR1H3-231ENST00000529540 SEPT9Q9UHD8 586 aaPredicted RBP15.97■□□□□ 0.15
NR1H3-231ENST00000529540 N4BP3O15049 544 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 ZNF862O60290 1169 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 F2P00734 622 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 SSBP05455 408 aaKnown RBP eCLIP15.96■□□□□ 0.15
NR1H3-231ENST00000529540 MCM3P25205 808 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 SLC12A3P55017 1021 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 PAK1Q13153 545 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 MCM6Q14566 821 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 GNASQ5JWF2 1037 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 KCNK18Q7Z418 384 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 SRLQ86TD4 932 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 ARRDC4Q8NCT1 418 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 PIGOQ8TEQ8 1089 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 C7orf25Q9BPX7 421 aa15.96■□□□□ 0.15
NR1H3-231ENST00000529540 C16orf70Q9BSU1 422 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms