RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 OATP04181 439 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 SMTNP53814 917 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 NAA30Q147X3 362 aaPredicted RBP18.42■□□□□ 0.54
SREK1-212ENST00000522912 SHCBP1Q8NEM2 672 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 C17orf75Q9HAS0 396 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 RRAGCQ9HB90 399 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 ATP6V0A4Q9HBG4 840 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 BTBD19C9JJ37 291 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 PDHXO00330 501 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 TRIM49P0CI25 452 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 TRIM49CP0CI26 452 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 CETPP11597 493 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 UCHL3P15374 230 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 FMO5P49326 533 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 KIF11P52732 1056 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 ASTE1Q2TB18 679 aaPredicted RBP18.42■□□□□ 0.54
SREK1-212ENST00000522912 ZNF662Q6ZS27 426 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 SLC35F6Q8N357 371 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 HAUS4Q9H6D7 363 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 GBA2Q9HCG7 927 aaPredicted RBP18.42■□□□□ 0.54
SREK1-212ENST00000522912 HSPBP1Q9NZL4 362 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 DDX41Q9UJV9 622 aaKnown RBP18.42■□□□□ 0.54
SREK1-212ENST00000522912 GUCA1BQ9UMX6 200 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 FHOD1Q9Y613 1164 aa18.42■□□□□ 0.54
SREK1-212ENST00000522912 ADGRA3Q8IWK6 1321 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 CCL15-CCL14A0A0B4J2E2 113 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 DENND3A2RUS2 1198 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 ANKRD63C9JTQ0 380 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 LCA5LO95447 670 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 RTP1P59025 263 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 BFSP1Q12934 665 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 MAPK8IP2Q13387 824 aaPredicted RBP18.41■□□□□ 0.54
SREK1-212ENST00000522912 PPP2R5AQ15172 486 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 CCL15Q16663 113 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 METTL7BQ6UX53 244 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 KIAA1328Q86T90 577 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 MAP4K3Q8IVH8 894 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 LRRN4CLQ8ND94 238 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 BRI3BPQ8WY22 251 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 HVCN1Q96D96 273 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 CEP89Q96ST8 783 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 MPHOSPH6Q99547 160 aaKnown RBP18.41■□□□□ 0.54
SREK1-212ENST00000522912 LACRTQ9GZZ8 138 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
SREK1-212ENST00000522912 GCNT4Q9P109 453 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 PLXNA1Q9UIW2 1896 aa18.41■□□□□ 0.54
SREK1-212ENST00000522912 PLXNB2O15031 1838 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 GTF2A2P52657 109 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 SNRPFP62306 86 aaKnown RBP18.4■□□□□ 0.54
SREK1-212ENST00000522912 RAPGEF1Q13905 1077 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 EMC2Q15006 297 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 CBWD6Q4V339 395 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 CBWD3Q5JTY5 395 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 CBWD5Q5RIA9 395 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 MORC4Q8TE76 937 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 JAKMIP2Q96AA8 810 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 NIFKQ9BYG3 293 aaKnown RBP18.4■□□□□ 0.54
SREK1-212ENST00000522912 AIPL1Q9NZN9 384 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 AJAP1Q9UKB5 411 aaPredicted RBP18.4■□□□□ 0.54
SREK1-212ENST00000522912 SSU72P8A0A1W2PR75 194 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 IPO7O95373 1038 aaKnown RBP18.4■□□□□ 0.54
SREK1-212ENST00000522912 SERPING1P05155 500 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 ADSSP30520 456 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 FKBP1BP68106 108 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 SPA17Q15506 151 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 CCDC122Q5T0U0 273 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 XXYLT1Q8NBI6 393 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 GPRC5AQ8NFJ5 357 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 GTF3C2Q8WUA4 911 aaPredicted RBP18.4■□□□□ 0.54
SREK1-212ENST00000522912 SEPT1Q8WYJ6 367 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 DEF6Q9H4E7 631 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 DHX33Q9H6R0 707 aaKnown RBP18.4■□□□□ 0.54
SREK1-212ENST00000522912 MLXIPQ9HAP2 919 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 MYO1AQ9UBC5 1043 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 EXOC7Q9UPT5 735 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 SLC45A1Q9Y2W3 748 aa18.4■□□□□ 0.54
SREK1-212ENST00000522912 AKR1B10O60218 316 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 TCF7P36402 384 aaPredicted RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 VAV2P52735 878 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 POLGP54098 1239 aaPredicted RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 DLG4P78352 724 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 SLC9C1Q4G0N8 1177 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 FBXO16Q8IX29 292 aaPredicted RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 ZNF710Q8N1W2 664 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 ANKRD13CQ8N6S4 541 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 ERO1AQ96HE7 468 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 PCDHA13Q9Y5I0 950 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 CNGA1P29973 690 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 STAT5BP51692 787 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 RBM10P98175 930 aaKnown RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 NCBP1Q09161 790 aaKnown RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 TARBP2Q15633 366 aaKnown RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 TDRD12Q587J7 1177 aaKnown RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 CELF3Q5SZQ8 465 aaKnown RBP18.39■□□□□ 0.53
SREK1-212ENST00000522912 SLC39A4Q6P5W5 647 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 GJB7Q6PEY0 223 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 KCNV1Q6PIU1 500 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 TAS1R3Q7RTX0 852 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 PLEKHO2Q8TD55 490 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms