RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CLEC14AQ86T13 490 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 AHI1Q8N157 1196 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 ANKRD53Q8N9V6 530 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 OR2W6PQ8NHA6 318 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 SLC7A6OSQ96CW6 309 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 CDK5RAP1Q96SZ6 601 aaKnown RBP4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 A0A1W2PRX2 142 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 TLDC2A0PJX2 215 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 TOX4O94842 621 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 RPS19P39019 145 aaKnown RBP4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 ZXDAP98168 799 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 SART3Q15020 963 aaKnown RBP4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 PRKD1Q15139 912 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 TERF2Q15554 542 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 MAMDC4Q6UXC1 1216 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 STRA8Q7Z7C7 330 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 ADGRE4PQ86SQ3 457 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 RNF180Q86T96 592 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 THNSL2Q86YJ6 484 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 PASD1Q8IV76 773 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 ZZZ3Q8IYH5 903 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 Q8N1X5 172 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 RABGGTAQ92696 567 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 EDAQ92838 391 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 GFM2Q969S9 779 aaKnown RBP4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 NOL10Q9BSC4 688 aaKnown RBP4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 SLC6A15Q9H2J7 730 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 PRDM12Q9H4Q4 367 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 EMC7Q9NPA0 242 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 TLR9Q9NR96 1032 aa4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P29-201ENST00000505659 PLSCR1O15162 318 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 AMHP03971 560 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 CLEC2LP0C7M8 214 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 SESN2P58004 480 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 BROXQ5VW32 411 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 SPTY2D1Q68D10 685 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 SDE2Q6IQ49 451 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 ESPNLQ6ZVH7 1005 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 GAREM2Q75VX8 874 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 CXorf67Q86X51 503 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 D2HGDHQ8N465 521 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 ZNF610Q8N9Z0 462 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 PLA2G15Q8NCC3 412 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 EXTL1Q92935 676 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 FERMT2Q96AC1 680 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 ZNF747Q9BV97 191 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 ANO3Q9BYT9 981 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 USP18Q9UMW8 372 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 SH3BP1Q9Y3L3 701 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 TESMINQ9Y4I5 508 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 PPP2R3BQ9Y5P8 575 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 MYPNQ86TC9 1320 aa4.91□□□□□ -1.62
HMGB1P29-201ENST00000505659 UBE2QL1A1L167 161 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 PRSS38A1L453 326 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 NEMP1O14524 444 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 KDM1AO60341 852 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 C6P13671 934 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 BPIP17213 487 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 LSP1P33241 339 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 PHC1P78364 1004 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 DGCR2P98153 550 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 DDB1Q16531 1140 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 NRN1LQ496H8 165 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 USP39Q53GS9 565 aaKnown RBP4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 GPR158Q5T848 1215 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 RNF207Q6ZRF8 634 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 PIK3C3Q8NEB9 887 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 SLC5A5Q92911 643 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 LPPQ93052 612 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 FDXACB1Q9BRP7 624 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 VPS11Q9H270 941 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 NELFAQ9H3P2 528 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 NCDNQ9UBB6 729 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 MAPRE3Q9UPY8 281 aa4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 TMA7Q9Y2S6 64 aaKnown RBP4.9□□□□□ -1.63
HMGB1P29-201ENST00000505659 PMS2P1A4D2B8 440 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 GOLGA8BA8MQT2 603 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 CAPN14A8MX76 684 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 PFKMP08237 780 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 GAAP10253 952 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 MANFP55145 182 aaKnown RBP4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 OCRLQ01968 901 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 STRN3Q13033 797 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 ATP13A4Q4VNC1 1196 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 KRT40Q6A162 431 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 CRIP3Q6Q6R5 217 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 C11orf74Q86VG3 221 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 SGMS1Q86VZ5 419 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 LYSMD2Q8IV50 215 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 IL17DQ8TAD2 202 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 FAM89AQ96GI7 184 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 SCAND2PQ9GZW5 306 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 TMPRSS5Q9H3S3 457 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 IL23AQ9NPF7 189 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 ING3Q9NXR8 418 aa4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 USP36Q9P275 1121 aaKnown RBP4.89□□□□□ -1.63
HMGB1P29-201ENST00000505659 TMPRSS11EQ9UL52 423 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms