RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 PRR33A8MZF0 331 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 P4HBP07237 508 aaKnown RBP22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 SKIP12755 728 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 KRT17Q04695 432 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 DRP2Q13474 957 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 KCNT2Q6UVM3 1135 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 ANO5Q75V66 913 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 RBM23Q86U06 439 aaKnown RBP22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 SMRP1Q8NCR6 262 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 MRPL9Q9BYD2 267 aaKnown RBP22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 BRMS1Q9HCU9 246 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 NGRNQ9NPE2 291 aaKnown RBP22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 CLEC1BQ9P126 229 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 ORC3Q9UBD5 711 aaPredicted RBP22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 VAV3Q9UKW4 847 aa22.39■■□□□ 1.17
UBE2D3-220ENST00000505307 FSCN2O14926 492 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 MARCH6O60337 910 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 CCNT1O60563 726 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 LRRC55Q6ZSA7 311 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 PIK3AP1Q6ZUJ8 805 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 ZNF598Q86UK7 904 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 SLC7A3Q8WY07 619 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 CYP26B1Q9NR63 512 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 SPG21Q9NZD8 308 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 HCSTQ9UBK5 93 aa22.38■■□□□ 1.17
UBE2D3-220ENST00000505307 A0A087WZ62 844 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 TMEM150BA6NC51 233 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 EML1O00423 815 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 BAG4O95429 457 aaKnown RBP22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 SRGAP2BP0DMP2 458 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 ERVFC1P60507 584 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 EPHA7Q15375 998 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 DUSP6Q16828 381 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 RHPN2Q8IUC4 686 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 SLFN12Q8IYM2 578 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 RNF169Q8NCN4 708 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 FDXACB1Q9BRP7 624 aaPredicted RBP22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 PLXNA4Q9HCM2 1894 aa22.37■■□□□ 1.17
UBE2D3-220ENST00000505307 CTDNEP1O95476 244 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 FGFR4P22455 802 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 PLA2G5P39877 138 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 AK2P54819 239 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 CLLU1OSQ5K130 101 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 OTUD6AQ7L8S5 288 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 C4orf19Q8IY42 314 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 FAM122AQ96E09 287 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 SH2D3AQ9BRG2 576 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 PCDHGC5Q9Y5F6 944 aa22.36■■□□□ 1.17
UBE2D3-220ENST00000505307 GAS2O43903 313 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 CSDE1O75534 798 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 GLP2RO95838 553 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 KRT2P35908 639 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 RFC5P40937 340 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 PHKA2P46019 1235 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 RAB27AP51159 221 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 BMS1Q14692 1282 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 TWF2Q6IBS0 349 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 TMEM184AQ6ZMB5 413 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 OXER1Q8TDS5 423 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 HAS1Q92839 578 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 CEP170P1Q96L14 293 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 TCF25Q9BQ70 676 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 ENTPD7Q9NQZ7 604 aa22.35■■□□□ 1.17
UBE2D3-220ENST00000505307 PER2O15055 1255 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 ZNF623O75123 536 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 ATF7P17544 494 aaPredicted RBP22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 ALDH7A1P49419 539 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 POLGP54098 1239 aaPredicted RBP22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 PLA2G4FQ68DD2 849 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 CATSPER4Q7RTX7 472 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 HELQQ8TDG4 1101 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 NLRP4Q96MN2 994 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 DHX33Q9H6R0 707 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 GJB4Q9NTQ9 266 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 BARX2Q9UMQ3 279 aaPredicted RBP22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 PIN4Q9Y237 131 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 COL4A3BPQ9Y5P4 624 aa22.34■■□□□ 1.17
UBE2D3-220ENST00000505307 ASAP2O43150 1006 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 NPEPPSP55786 919 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 HERC4Q5GLZ8 1057 aaPredicted RBP22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 PLPP4Q5VZY2 271 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 TMC7Q7Z402 723 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 SRGAP1Q7Z6B7 1085 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 SLC39A11Q8N1S5 342 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 TCP11Q8WWU5 503 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 PSPC1Q8WXF1 523 aaKnown RBP22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 GTF3C6Q969F1 213 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 LXNQ9BS40 222 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 ZSWIM4Q9H7M6 989 aa22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 USP15Q9Y4E8 981 aaPredicted RBP22.33■■□□□ 1.17
UBE2D3-220ENST00000505307 FDPSP14324 419 aaKnown RBP22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 YWHABP31946 246 aaKnown RBP22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 ME3Q16798 604 aa22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 GLB1LQ6UWU2 654 aa22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 POTEDQ86YR6 584 aa22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 PGBD4Q96DM1 585 aa22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 IFT122Q9HBG6 1241 aa22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 FAM105AQ9NUU6 356 aa22.32■■□□□ 1.16
UBE2D3-220ENST00000505307 HOXB8P17481 243 aaPredicted RBP22.31■■□□□ 1.16
UBE2D3-220ENST00000505307 SPIRE1Q08AE8 756 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms