RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 ARFGEF1Q9Y6D6 1849 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 ABCB11O95342 1321 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 A0A087X0T9 212 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CLRN2A0PK11 232 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 TCP10L2B9ZVM9 353 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 EML1O00423 815 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 MSH4O15457 936 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 MAP3K13O43283 966 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 TACC1O75410 805 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CFBP00751 764 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 FAM228BP0C875 321 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 MYBP10242 640 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SLC9A1P19634 815 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 HOXD13P35453 343 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 KCNH2Q12809 1159 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 GIT2Q14161 759 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 MYBPC3Q14896 1274 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 ZYXQ15942 572 aaKnown RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 PTPROQ16827 1216 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 KIAA1755Q5JYT7 1200 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 HAUS3Q68CZ6 603 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CYB5D1Q6P9G0 228 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 TMEM179Q6ZVK1 233 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 ARMC9Q7Z3E5 817 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CDAN1Q8IWY9 1227 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 ACER1Q8TDN7 264 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 DCAF4Q8WV16 495 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 NSMCE1Q8WV22 266 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 AKT1S1Q96B36 256 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 MS4A14Q96JA4 679 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 LRRC1Q9BTT6 524 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 IDI2Q9BXS1 227 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 PACSIN1Q9BY11 444 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 PAPOLBQ9NRJ5 636 aaKnown RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 TMOD4Q9NZQ9 345 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CORO1CQ9ULV4 474 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 HPCAL4Q9UM19 191 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SCAF8Q9UPN6 1271 aaKnown RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SSUH2Q9Y2M2 353 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SIPA1L1O43166 1804 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CYP3A7-CYP3A51PA0A087WV96 503 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SOCS7O14512 581 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CLIC2O15247 247 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 LCA5LO95447 670 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 BMP3P12645 472 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 RFX1P22670 979 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 VAMP1P23763 118 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CYP3A7P24462 503 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 KLRC1P26715 233 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 RPA1P27694 616 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 EPS15P42566 896 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CASP4P49662 377 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CDR1P51861 262 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 RNASE9P60153 205 aaKnown RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 TUBB4BP68371 445 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 IFT88Q13099 833 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CTTNQ14247 550 aaKnown RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SLC9C1Q4G0N8 1177 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 DCAF17Q5H9S7 520 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SYDE2Q5VT97 1194 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 TCERG1LQ5VWI1 586 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 GET4Q7L5D6 327 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SLFN12Q8IYM2 578 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SYCP3Q8IZU3 236 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 FUKQ8N0W3 1084 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 SPATA4Q8NEY3 305 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 MORC4Q8TE76 937 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 STAMBPL1Q96FJ0 436 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 RUSC1Q9BVN2 902 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 TLR10Q9BXR5 811 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 GOLPH3Q9H4A6 298 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 METTL14Q9HCE5 456 aaKnown RBP5.6□□□□□ -1.51
CLDND1-208ENST00000503004 CEP72Q9P209 647 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 PRR12Q9ULL5 1215 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 DNM3Q9UQ16 869 aa5.6□□□□□ -1.51
CLDND1-208ENST00000503004 COL11A2P13942 1736 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 NRXN2Q9P2S2 1712 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 YDJCA8MPS7 323 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 H0YIN7 160 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 CETN3O15182 167 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 ZNF189O75820 626 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 AKAP3O75969 853 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 FTCDO95954 541 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 FERP16591 822 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 ZNF76P36508 570 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SREBF1P36956 1147 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 CKAP4Q07065 602 aaKnown RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 AP3B2Q13367 1082 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 GNPTABQ3T906 1256 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 LRRC23Q53EV4 343 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-208ENST00000503004 KLHDC7AQ5VTJ3 777 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 CCDC174Q6PII3 467 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 KSR1Q8IVT5 923 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SH2D3CQ8N5H7 860 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 MBOAT7Q96N66 472 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SPAG5Q96R06 1193 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 GBP3Q9H0R5 595 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 PIDD1Q9HB75 910 aa5.59□□□□□ -1.51
CLDND1-208ENST00000503004 SPATA7Q9P0W8 599 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms