RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 PHKA2P46019 1235 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 SPECC1Q5M775 1068 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 FAM117BQ6P1L5 589 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 ASAP3Q8TDY4 903 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 TIFAQ96CG3 184 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 EPSTI1Q96J88 318 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 CCSER1Q9C0I3 900 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 CFAP45Q9UL16 551 aa18.02■□□□□ 0.48
YIF1A-209ENST00000494836 TLL1O43897 1013 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 PPP6R2O75170 966 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 SSBP05455 408 aaKnown RBP eCLIP18.01■□□□□ 0.47
YIF1A-209ENST00000494836 PLCG1P19174 1290 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 FGFR4P22455 802 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 GLRA2P23416 452 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 DNM1Q05193 864 aaKnown RBP18.01■□□□□ 0.47
YIF1A-209ENST00000494836 CAPSQ13938 189 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 KARSQ15046 597 aaKnown RBP18.01■□□□□ 0.47
YIF1A-209ENST00000494836 SRGAP1Q7Z6B7 1085 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 KCNG4Q8TDN1 519 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 SYMPKQ92797 1274 aaKnown RBP18.01■□□□□ 0.47
YIF1A-209ENST00000494836 TOP1MTQ969P6 601 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 YBX2Q9Y2T7 364 aaKnown RBP18.01■□□□□ 0.47
YIF1A-209ENST00000494836 ATP6V1DQ9Y5K8 247 aa18.01■□□□□ 0.47
YIF1A-209ENST00000494836 TMEM265A0A087WTH1 108 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 MGEA5O60502 916 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 UPP2O95045 317 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 PLA2G4BP0C869 781 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 ANP32AP39687 249 aaKnown RBP18■□□□□ 0.47
YIF1A-209ENST00000494836 POU5F1BQ06416 359 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 ZNF697Q5TEC3 545 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 USP49Q70CQ1 688 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 CATSPER4Q7RTX7 472 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 RTN4RL1Q86UN2 441 aaPredicted RBP18■□□□□ 0.47
YIF1A-209ENST00000494836 KIFAP3Q92845 792 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 ADAM2Q99965 735 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 RUSC1Q9BVN2 902 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 C1orf112Q9NSG2 853 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 CCDC39Q9UFE4 941 aa18■□□□□ 0.47
YIF1A-209ENST00000494836 LRRIQ4A6NIV6 560 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 CA3P07451 260 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 MYOGP15173 224 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 ZSCAN20P17040 1043 aaPredicted RBP17.99■□□□□ 0.47
YIF1A-209ENST00000494836 NCLP19338 710 aaKnown RBP17.99■□□□□ 0.47
YIF1A-209ENST00000494836 PTENP60484 403 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 RINT1Q6NUQ1 792 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 SYT2Q8N9I0 419 aaPredicted RBP17.99■□□□□ 0.47
YIF1A-209ENST00000494836 RAD9AQ99638 391 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 MINDY3Q9H8M7 445 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 SLC28A3Q9HAS3 691 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 RGS18Q9NS28 235 aa17.99■□□□□ 0.47
YIF1A-209ENST00000494836 TTC3P53804 2025 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 CUTAO60888 179 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 ME1P48163 572 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 SLC12A3P55017 1021 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 KRT85P78386 507 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 NUCB2P80303 420 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 DSC3Q14574 896 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 PPP2R5AQ15172 486 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 PPP2R2DQ66LE6 453 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 C1orf186Q6ZWK4 172 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 SLC24A5Q71RS6 500 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
YIF1A-209ENST00000494836 NPAS4Q8IUM7 802 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 IFT74Q96LB3 600 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 DRC1Q96MC2 740 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 YME1L1Q96TA2 773 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 TIPINQ9BVW5 301 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 NFKBIZQ9BYH8 718 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 CHST12Q9NRB3 414 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
YIF1A-209ENST00000494836 DACT1Q9NYF0 836 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 KCND2Q9NZV8 630 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 PIN4Q9Y237 131 aaKnown RBP17.98■□□□□ 0.47
YIF1A-209ENST00000494836 INSL6Q9Y581 213 aa17.98■□□□□ 0.47
YIF1A-209ENST00000494836 CHD9Q3L8U1 2897 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 INO80B-WBP1J3KQ70 363 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 HIP1RO75146 1068 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 ERLIN2O94905 339 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 STAG3L1P0CL83 205 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 IBSPP21815 317 aaPredicted RBP17.97■□□□□ 0.47
YIF1A-209ENST00000494836 GUCY2CP25092 1073 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 DDIT3P35638 169 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 NAMPTP43490 491 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 SARSP49591 514 aaKnown RBP17.97■□□□□ 0.47
YIF1A-209ENST00000494836 HTRA4P83105 476 aaPredicted RBP17.97■□□□□ 0.47
YIF1A-209ENST00000494836 PCBP1Q15365 356 aaKnown RBP eCLIP17.97■□□□□ 0.47
YIF1A-209ENST00000494836 Q7L0L9 218 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 ZBTB8OSQ8IWT0 167 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 DEFB123Q8N688 67 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 LRRC15Q8TF66 581 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 BSNDQ8WZ55 320 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 LARP4BQ92615 738 aaKnown RBP17.97■□□□□ 0.47
YIF1A-209ENST00000494836 RAD54LQ92698 747 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 BLOC1S4Q9NUP1 217 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 AGPAT5Q9NUQ2 364 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 STK17AQ9UEE5 414 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 LRFN2Q9ULH4 789 aa17.97■□□□□ 0.47
YIF1A-209ENST00000494836 LCHNA4D1U4 455 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms