RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 EPHB6O15197 1021 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 PJA2O43164 708 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 FOSP01100 380 aaPredicted RBP20.03■□□□□ 0.8
COL16A1-215ENST00000488897 MYCNP04198 464 aaPredicted RBP20.03■□□□□ 0.8
COL16A1-215ENST00000488897 COPB2P35606 906 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 ABRAQ8N0Z2 381 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 SNX29Q8TEQ0 813 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 PNMA2Q9UL42 364 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 FAM184BQ9ULE4 1060 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 CAPN6Q9Y6Q1 641 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 LRRC53A6NM62 1247 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 ZMYND10O75800 440 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 MAGEA1P43355 309 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 TMEM119Q4V9L6 283 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 LRRC55Q6ZSA7 311 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 DNERQ8NFT8 737 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 DDX12PQ92771 950 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 APBA2Q99767 749 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 KCNH7Q9NS40 1196 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 HYOU1Q9Y4L1 999 aa20.02■□□□□ 0.8
COL16A1-215ENST00000488897 MOCS3O95396 460 aa20.02■□□□□ 0.79
COL16A1-215ENST00000488897 CCND2P30279 289 aa20.02■□□□□ 0.79
COL16A1-215ENST00000488897 CCND3P30281 292 aaPredicted RBP20.02■□□□□ 0.79
COL16A1-215ENST00000488897 EHHADHQ08426 723 aa20.02■□□□□ 0.79
COL16A1-215ENST00000488897 STXBP2Q15833 593 aa20.02■□□□□ 0.79
COL16A1-215ENST00000488897 PCNX4Q63HM2 1172 aa20.02■□□□□ 0.79
COL16A1-215ENST00000488897 BAP1Q92560 729 aa20.02■□□□□ 0.79
COL16A1-215ENST00000488897 MLXIPQ9HAP2 919 aa20.02■□□□□ 0.79
COL16A1-215ENST00000488897 SSU72P8A0A1W2PR75 194 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 CHMP2AO43633 222 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 CACNB2Q08289 660 aaPredicted RBP20.01■□□□□ 0.79
COL16A1-215ENST00000488897 SLC20A2Q08357 652 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
COL16A1-215ENST00000488897 CEP55Q53EZ4 464 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 PDXDC1Q6P996 788 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 CACNA2D4Q7Z3S7 1137 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 CCDC155Q8N6L0 562 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 OSBPL9Q96SU4 736 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 MXRA8Q9BRK3 442 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 NUCKS1Q9H1E3 243 aaKnown RBP20.01■□□□□ 0.79
COL16A1-215ENST00000488897 KIAA1217Q5T5P2 1943 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 MSH4O15457 936 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 PPP4R3AQ6IN85 833 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 MYOCDQ8IZQ8 938 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 SPATA4Q8NEY3 305 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 AENQ8WTP8 325 aaKnown RBP20.01■□□□□ 0.79
COL16A1-215ENST00000488897 SOCS4Q8WXH5 440 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 HAS1Q92839 578 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 GLT8D2Q9H1C3 349 aa20.01■□□□□ 0.79
COL16A1-215ENST00000488897 LAMA2P24043 3122 aaKnown RBP20■□□□□ 0.79
COL16A1-215ENST00000488897 POTEFA5A3E0 1075 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 POTEMA6NI47 508 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 MYBL2P10244 700 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 EDNRBP24530 442 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 ITGB3BPQ13352 177 aaPredicted RBP20■□□□□ 0.79
COL16A1-215ENST00000488897 MTMR1Q13613 665 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 TAPT1Q6NXT6 567 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 SRLQ86TD4 932 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 RNF10Q8N5U6 811 aaKnown RBP20■□□□□ 0.79
COL16A1-215ENST00000488897 KATNBL1Q9H079 304 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 FEZ2Q9UHY8 353 aaPredicted RBP20■□□□□ 0.79
COL16A1-215ENST00000488897 GGCXP38435 758 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 PAFAH1B1P43034 410 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 CTCFP49711 727 aaPredicted RBP20■□□□□ 0.79
COL16A1-215ENST00000488897 FKBP3Q00688 224 aaKnown RBP20■□□□□ 0.79
COL16A1-215ENST00000488897 ACVR2BQ13705 512 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 MTFR1Q15390 333 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 CCDC181Q5TID7 509 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 MAP3K20Q9NYL2 800 aaKnown RBP20■□□□□ 0.79
COL16A1-215ENST00000488897 UBIAD1Q9Y5Z9 338 aa20■□□□□ 0.79
COL16A1-215ENST00000488897 HOXC6P09630 235 aa19.99■□□□□ 0.79
COL16A1-215ENST00000488897 PRKAR2AP13861 404 aaKnown RBP19.99■□□□□ 0.79
COL16A1-215ENST00000488897 ASTE1Q2TB18 679 aaPredicted RBP19.99■□□□□ 0.79
COL16A1-215ENST00000488897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL16A1-215ENST00000488897 DRC1Q96MC2 740 aa19.99■□□□□ 0.79
COL16A1-215ENST00000488897 BMP2KQ9NSY1 1161 aaPredicted RBP19.99■□□□□ 0.79
COL16A1-215ENST00000488897 COL4A3BPQ9Y5P4 624 aa19.99■□□□□ 0.79
COL16A1-215ENST00000488897 FRMPD4Q14CM0 1322 aa19.99■□□□□ 0.79
COL16A1-215ENST00000488897 MYO1CO00159 1063 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 MEIS1O00470 390 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 OLFML2BQ68BL8 750 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 LRRC31Q6UY01 552 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 CYFIP1Q7L576 1253 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 GSPT2Q8IYD1 628 aaKnown RBP19.98■□□□□ 0.79
COL16A1-215ENST00000488897 SYN2Q92777 582 aaPredicted RBP19.98■□□□□ 0.79
COL16A1-215ENST00000488897 GDAP1L1Q96MZ0 367 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 NOX5Q96PH1 765 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 LRRC1Q9BTT6 524 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 RRP15Q9Y3B9 282 aaKnown RBP19.98■□□□□ 0.79
COL16A1-215ENST00000488897 GOLGA6BA6NDN3 693 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 USP11P51784 963 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 LUC7LQ9NQ29 371 aaKnown RBP19.98■□□□□ 0.79
COL16A1-215ENST00000488897 CEP72Q9P209 647 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 PTPN22Q9Y2R2 807 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 MYH10P35580 1976 aa19.98■□□□□ 0.79
COL16A1-215ENST00000488897 AGPSO00116 658 aa19.97■□□□□ 0.79
COL16A1-215ENST00000488897 SLC9C1Q4G0N8 1177 aa19.97■□□□□ 0.79
COL16A1-215ENST00000488897 NFRKBQ6P4R8 1299 aa19.97■□□□□ 0.79
COL16A1-215ENST00000488897 MAMDC4Q6UXC1 1216 aa19.97■□□□□ 0.79
COL16A1-215ENST00000488897 KCNK18Q7Z418 384 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms