RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RNF34Q969K3 372 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 ZNF302Q9NR11 478 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 FBXO40Q9UH90 709 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 ATP8A1Q9Y2Q0 1164 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 LMO7Q8WWI1 1683 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 AFDNP55196 1824 aaKnown RBP12.18□□□□□ -0.46
SMPD4-218ENST00000482171 ZNF185O15231 689 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 CRY2Q49AN0 593 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 MAGOHBQ96A72 148 aaKnown RBP12.18□□□□□ -0.46
SMPD4-218ENST00000482171 TMEM143Q96AN5 459 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 CAPN11Q9UMQ6 739 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 EMSYQ7Z589 1322 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 SLC9A1P19634 815 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SNX1Q13596 522 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 BEND6Q5SZJ8 279 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 PASD1Q8IV76 773 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 GLYCTKQ8IVS8 523 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 ZNF384Q8TF68 577 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 IQCGQ9H095 443 aaKnown RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 EHD4Q9H223 541 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 JPH1Q9HDC5 661 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SLC9A2Q9UBY0 812 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 FAM208AQ9UK61 1670 aaKnown RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 A0A1W2PQC6 194 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 CLDN3O15551 220 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 CYP11B2P19099 503 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 VAMP7P51809 220 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 ZNF131P52739 623 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 IFRD2Q12894 506 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 NFRKBQ6P4R8 1299 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 STMN2Q93045 179 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 RAB17Q9H0T7 212 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 POLR3FQ9H1D9 316 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SPC25Q9HBM1 224 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 GAKO14976 1311 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 MAPK4P31152 587 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 GBP1P32455 592 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 PMS1P54277 932 aaKnown RBP12.17□□□□□ -0.46
SMPD4-218ENST00000482171 CORO7P57737 925 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 GUCY1A3Q02108 690 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SEMA3FQ13275 785 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 RHPN2Q8IUC4 686 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 C7orf31Q8N865 590 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 MXRA8Q9BRK3 442 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 KIFC3Q9BVG8 833 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 TMX2Q9Y320 296 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SFNP31947 248 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 STX2P32856 288 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 PSMC6P62333 389 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 TSNAXIP1Q2TAA8 658 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 AP1ARQ63HQ0 302 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 SLC17A8Q8NDX2 589 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 PPP1R14CQ8TAE6 165 aa12.17□□□□□ -0.46
SMPD4-218ENST00000482171 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 GAS8O95995 478 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 P4HA1P13674 534 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 TBC1D1Q86TI0 1168 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-218ENST00000482171 NEK9Q8TD19 979 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 RUSC1Q9BVN2 902 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 TUFT1Q9NNX1 390 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 PARP2Q9UGN5 583 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 TBX3O15119 743 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 DAPK3O43293 454 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 IRAK1P51617 712 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 DHX9Q08211 1270 aaKnown RBP12.16□□□□□ -0.46
SMPD4-218ENST00000482171 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-218ENST00000482171 PSMD1Q99460 953 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 PLCB1Q9NQ66 1216 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 RGPD5Q99666 1765 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 PDXKO00764 312 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 GGPS1O95749 300 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 ATP5DP30049 168 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-218ENST00000482171 PPP1R21Q6ZMI0 780 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 HOMER3Q9NSC5 361 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMPD4-218ENST00000482171 PLAAQ9Y263 795 aa12.16□□□□□ -0.46
SMPD4-218ENST00000482171 SLCO1A2P46721 670 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 SESN3P58005 492 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 BSPRYQ5W0U4 402 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 LRRC31Q6UY01 552 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 RNF10Q8N5U6 811 aaKnown RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 LRRC1Q9BTT6 524 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 SPATS2LQ9NUQ6 558 aaKnown RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 L1RE1Q9UN81 338 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 TTLL3Q9Y4R7 772 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-218ENST00000482171 BPIFB4P59827 614 aa12.15□□□□□ -0.46
SMPD4-218ENST00000482171 ADCY1Q08828 1119 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms