RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 AKR1B1P15121 316 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 KCNA2P16389 499 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 DESP17661 470 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 AGXTP21549 392 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 HTR1BP28222 390 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 POLR2BP30876 1174 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ABCD1P33897 745 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 GGCXP38435 758 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 TDO2P48775 406 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CDK8P49336 464 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 MECP2P51608 486 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 DRG2P55039 364 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 TPD52P55327 224 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CABP4P57796 275 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 GPR85P60893 370 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ETF1P62495 437 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 VAMP2P63027 116 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ST5P78524 1137 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 POU4F2Q12837 409 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CDC16Q13042 620 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 PAK1Q13153 545 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 TRPC3Q13507 836 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 NEUROD1Q13562 356 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 MBTPS1Q14703 1052 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 SNX17Q15036 470 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 PLCL1Q15111 1095 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 UAP1L1Q3KQV9 507 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ZACNQ401N2 412 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 NOL9Q5SY16 702 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 TDRD10Q5VZ19 366 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 FAM205BPQ63HN1 556 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 FIGNL1Q6PIW4 674 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC73Q6ZRK6 1079 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ENOSF1Q7L5Y1 443 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 MAEAQ7L5Y9 396 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 DHX32Q7L7V1 743 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 GALNT13Q8IUC8 556 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 SIAH1Q8IUQ4 282 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 RPAP2Q8IXW5 612 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ZZZ3Q8IYH5 903 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 MICALL1Q8N3F8 863 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 DEFB123Q8N688 67 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF610Q8N9Z0 462 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 TMEM145Q8NBT3 493 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 PPP1R35Q8TAP8 253 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 SP7Q8TDD2 431 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 GPBAR1Q8TDU6 330 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ADAMTS15Q8TE58 950 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ZFPM2Q8WW38 1151 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 IPCEF1Q8WWN9 437 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 N4BP2L2Q92802 583 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 OTUD5Q96G74 571 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 APIPQ96GX9 242 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 RADILQ96JH8 1075 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 C7orf26Q96N11 449 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 POP1Q99575 1024 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 UNKQ9C0B0 810 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 KIAA1683Q9H0B3 1180 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 RASSF4Q9H2L5 321 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CRISPLD1Q9H336 500 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 NOL6Q9H6R4 1146 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CYP4F11Q9HBI6 524 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 PREBQ9HCU5 417 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 PNPLA8Q9NP80 782 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 TIMMDC1Q9NPL8 285 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ATP8A2Q9NTI2 1148 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CCM2LQ9NUG4 571 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 DACT1Q9NYF0 836 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 MTRRQ9UBK8 725 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 STAP2Q9UGK3 403 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 KNSTRNQ9Y448 316 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF451Q9Y4E5 1061 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 PCDHA11Q9Y5I1 949 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 SPO11Q9Y5K1 396 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 GPR45Q9Y5Y3 372 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 IKBKGQ9Y6K9 419 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 WASF2Q9Y6W5 498 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 SIGLEC1Q9BZZ2 1709 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 NEO1Q92859 1461 aa3.26□□□□□ -1.89
HMGN4-202ENST00000477243 WRNQ14191 1432 aaPredicted RBP eCLIP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 ZCCHC11Q5TAX3 1644 aaKnown RBP3.26□□□□□ -1.89
HMGN4-202ENST00000477243 LAMB2P55268 1798 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 FN1P02751 2386 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 POLQO75417 2590 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ABCA3Q99758 1704 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 HNRNPDLO14979 420 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 TMEM127O75204 238 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 NDUFS2O75306 463 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 H2AFYO75367 372 aaKnown RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 FSBPO95073 299 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 STARD3NLO95772 234 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 TBX18O95935 607 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ALDH1A1P00352 501 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 CKMP06732 381 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 POLBP06746 335 aa3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF865P0CJ78 1059 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ESRRAP11474 423 aaPredicted RBP3.25□□□□□ -1.89
HMGN4-202ENST00000477243 ITIH2P19823 946 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms