RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 AKT3Q9Y243 479 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 SQORQ9Y6N5 450 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 ALPK3Q96L96 1907 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 RSPH10B2B2RC85 870 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 M0QZ92 97 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 PARNO95453 639 aaKnown RBP16.74■□□□□ 0.27
MCF2L-224ENST00000475524 RSPH10BP0C881 870 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 PPP1R2P41236 205 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 GPC3P51654 580 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 EFNA5P52803 228 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 NCKAP1LP55160 1127 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 RAD51AP2Q09MP3 1159 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 DRP2Q13474 957 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 CAMK4Q16566 473 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 TRIM60Q495X7 471 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 KMT5BQ4FZB7 885 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 COBLL1Q53SF7 1204 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 HERC4Q5GLZ8 1057 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-224ENST00000475524 FAM26FQ5R3K3 315 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 CDCA2Q69YH5 1023 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-224ENST00000475524 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
MCF2L-224ENST00000475524 STXBP4Q6ZWJ1 553 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 SFR1Q86XK3 245 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 FAM178BQ8IXR5 827 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 MYCT1Q8N699 235 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 ASAP3Q8TDY4 903 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 DNAJB3Q8WWF6 145 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 ARHGAP28Q9P2N2 729 aa16.74■□□□□ 0.27
MCF2L-224ENST00000475524 UBE4BO95155 1302 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.27
MCF2L-224ENST00000475524 PQBP1O60828 265 aaKnown RBP16.73■□□□□ 0.27
MCF2L-224ENST00000475524 CASP1P29466 404 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 PHKA2P46019 1235 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 NPTX2P47972 431 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 ATN1P54259 1190 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-224ENST00000475524 PEX3P56589 373 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 MRPS6P82932 125 aaKnown RBP16.73■□□□□ 0.27
MCF2L-224ENST00000475524 TLE2Q04725 743 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 CAPSQ13938 189 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 LRRC26Q2I0M4 334 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 MAEAQ7L5Y9 396 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 SRGAP1Q7Z6B7 1085 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 RHPN2Q8IUC4 686 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 PPP1R13LQ8WUF5 828 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 DHX38Q92620 1227 aaKnown RBP16.73■□□□□ 0.27
MCF2L-224ENST00000475524 FIZ1Q96SL8 496 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 HTATIP2Q9BUP3 242 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 INO80BQ9C086 356 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-224ENST00000475524 FAM49AQ9H0Q0 323 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-224ENST00000475524 ADAMTS10Q9H324 1103 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 TMEM134Q9H6X4 195 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 TRPV2Q9Y5S1 764 aa16.73■□□□□ 0.27
MCF2L-224ENST00000475524 GPR32O75388 356 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 PPP1R37O75864 691 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 KIF20AO95235 890 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 CLTBP09497 229 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 CRYBB1P53674 252 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-224ENST00000475524 SOX10P56693 466 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 NLRP11P59045 1033 aaKnown RBP16.72■□□□□ 0.27
MCF2L-224ENST00000475524 PTENP60484 403 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-224ENST00000475524 MGAT3Q09327 533 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 FAAP100Q0VG06 881 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 ZNF658Q5TYW1 1059 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-224ENST00000475524 ZBTB8OSQ8IWT0 167 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 DEPTORQ8TB45 409 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 BSNDQ8WZ55 320 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 ZBTB10Q96DT7 871 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 CELF4Q9BZC1 486 aaKnown RBP16.72■□□□□ 0.27
MCF2L-224ENST00000475524 GCOM2Q9BZD3 368 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-224ENST00000475524 ZHX3Q9H4I2 956 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 KMT5AQ9NQR1 393 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 TBX21Q9UL17 535 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
MCF2L-224ENST00000475524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-224ENST00000475524 LRRIQ4A6NIV6 560 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 VTNP04004 478 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 CKBP12277 381 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 THPOP40225 353 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 GTF2BQ00403 316 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 MORC3Q14149 939 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 FAM187BQ17R55 369 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 BMT2Q1RMZ1 405 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 ZNF720Q7Z2F6 126 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 WNT8BQ93098 351 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 MRPL44Q9H9J2 332 aaKnown RBP16.71■□□□□ 0.27
MCF2L-224ENST00000475524 IFT122Q9HBG6 1241 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 ATP11BQ9Y2G3 1177 aa16.71■□□□□ 0.27
MCF2L-224ENST00000475524 CCDC85CA6NKD9 419 aa16.7■□□□□ 0.26
MCF2L-224ENST00000475524 CCDC169A6NNP5 214 aa16.7■□□□□ 0.26
MCF2L-224ENST00000475524 SFI1A8K8P3 1242 aa16.7■□□□□ 0.26
MCF2L-224ENST00000475524 KIAA0355O15063 1070 aa16.7■□□□□ 0.26
MCF2L-224ENST00000475524 DARSP14868 501 aaKnown RBP16.7■□□□□ 0.26
MCF2L-224ENST00000475524 SELPP16109 830 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms