RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PHLPP2Q6ZVD8 1323 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 ESYT2A0FGR8 921 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 H7C1D1 291 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 CYP26A1O43174 497 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 CTIFO43310 598 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 MARCH6O60337 910 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 SLU7O95391 586 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 FGFR1OPO95684 399 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 CCDC175P0C221 793 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 ATP1A3P13637 1013 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 GSTT1P30711 240 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 TRAF1Q13077 416 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 GPATCH4Q5T3I0 446 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF658Q5TYW1 1059 aaPredicted RBP6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 RCSD1Q6JBY9 416 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 ARMCX5Q6P1M9 558 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 PTF1AQ7RTS3 328 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 NEK8Q86SG6 692 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 SULF2Q8IWU5 870 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 REXO1Q8N1G1 1221 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 SPATA20Q8TB22 786 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 TEKT1Q969V4 418 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 IQCDQ96DY2 449 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 DYNLL2Q96FJ2 89 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 EPSTI1Q96J88 318 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 PPP1R13BQ96KQ4 1090 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 CCDC17Q96LX7 622 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 PANX2Q96RD6 677 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 EMILIN2Q9BXX0 1053 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 DISC1Q9NRI5 854 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 EXOC1Q9NV70 894 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 MAD2L2Q9UI95 211 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 PCDHA6Q9UN73 950 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 CTNND2Q9UQB3 1225 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 PCDHA8Q9Y5H6 950 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 CEP350Q5VT06 3117 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 CASZ1Q86V15 1759 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 PLIN4Q96Q06 1357 aa6.57□□□□□ -1.36
ATPAF1-204ENST00000474020 MYH6P13533 1939 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 COL4A1P02462 1669 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 TAF1LQ8IZX4 1826 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 SMCO2A6NFE2 343 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 WTIPA6NIX2 430 aaPredicted RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 STXBP3O00186 592 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 GIPC1O14908 333 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 N4BP3O15049 544 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 FOXN1O15353 648 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 DYNC1LI2O43237 492 aaPredicted RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 KIF5CO60282 957 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 IPO7O95373 1038 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 TTLL1O95922 423 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 RPN1P04843 607 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF18P17022 549 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 NME2P22392 152 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 EEF1GP26641 437 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 ARNTP27540 789 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 CASQ1P31415 396 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 MRPL12P52815 198 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 TUBB4BP68371 445 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 ATP2B2Q01814 1243 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 GRIN1Q05586 938 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 PICALMQ13492 652 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 TUBB2AQ13885 445 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 KCNB1Q14721 858 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 INF2Q27J81 1249 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 CCDC96Q2M329 555 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 CNNM4Q6P4Q7 775 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 SMIM5Q71RC9 77 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF765Q7L2R6 523 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 CABP7Q86V35 215 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 GRAMD1CQ8IYS0 662 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 IGSF22Q8N9C0 903 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 SUPT20HQ8NEM7 779 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 NELFBQ8WX92 580 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 MASTLQ96GX5 879 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 NECAB3Q96P71 396 aaPredicted RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 TUBB2BQ9BVA1 445 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 CCDC94Q9BW85 323 aaPredicted RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 OSBPL7Q9BZF2 842 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 CCSER1Q9C0I3 900 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 ZMYND12Q9H0C1 365 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 DHX36Q9H2U1 1008 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 PIDD1Q9HB75 910 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 IL17RBQ9NRM6 502 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNHIT6Q9NWK9 470 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 SERPINB13Q9UIV8 391 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 PPM1HQ9ULR3 514 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 C10orf71Q711Q0 1435 aa6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 BAZ2AQ9UIF9 1905 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-204ENST00000474020 ITIH6Q6UXX5 1313 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 MYH2Q9UKX2 1941 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 KLRG2A4D1S0 409 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 MPHOSPH10O00566 681 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 SLC26A4O43511 780 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 CCNT1O60563 726 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 TRIM37O94972 964 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms