RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 TMEM143Q96AN5 459 aa13.1□□□□□ -0.31
SNU13-207ENST00000469522 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
SNU13-207ENST00000469522 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
SNU13-207ENST00000469522 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
SNU13-207ENST00000469522 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
SNU13-207ENST00000469522 LRFN2Q9ULH4 789 aa13.1□□□□□ -0.31
SNU13-207ENST00000469522 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
SNU13-207ENST00000469522 A0A0U1RQF3 1178 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 H3BQ06 376 aaPredicted RBP13.09□□□□□ -0.31
SNU13-207ENST00000469522 LINC01565O15544 149 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 LYPLA2O95372 231 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 PBX3P40426 434 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 TXKP42681 527 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 NBR1Q14596 966 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNU13-207ENST00000469522 LEXMQ3ZCV2 418 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 ZNF410Q86VK4 478 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 C4orf32Q8N8J7 132 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 COLGALT1Q8NBJ5 622 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 POF1BQ8WVV4 589 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 PRPF31Q8WWY3 499 aaKnown RBP13.09□□□□□ -0.31
SNU13-207ENST00000469522 PABPC5Q96DU9 382 aaKnown RBP13.09□□□□□ -0.31
SNU13-207ENST00000469522 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 NLRP4Q96MN2 994 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 ZSWIM4Q9H7M6 989 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
SNU13-207ENST00000469522 ATP6V0A4Q9HBG4 840 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 SH2B1Q9NRF2 756 aaPredicted RBP13.09□□□□□ -0.31
SNU13-207ENST00000469522 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 COL4A3BPQ9Y5P4 624 aa13.09□□□□□ -0.31
SNU13-207ENST00000469522 B4GALT3O60512 393 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 TBX10O75333 385 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 IL9P15248 144 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 ATP2B1P20020 1258 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 HOXA11P31270 313 aaPredicted RBP13.08□□□□□ -0.32
SNU13-207ENST00000469522 MCM7P33993 719 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 DNM2P50570 870 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
SNU13-207ENST00000469522 ERVFC1P60507 584 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 LAMTOR4Q0VGL1 99 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 EMC2Q15006 297 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 AAK1Q2M2I8 961 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 EXOC8Q8IYI6 725 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 ASAP3Q8TDY4 903 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 LPPQ93052 612 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 SCLT1Q96NL6 688 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 JPH2Q9BR39 696 aaPredicted RBP13.08□□□□□ -0.32
SNU13-207ENST00000469522 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 GCOM2Q9BZD3 368 aaPredicted RBP13.08□□□□□ -0.32
SNU13-207ENST00000469522 TMEM117Q9H0C3 514 aa13.08□□□□□ -0.32
SNU13-207ENST00000469522 FOXP1Q9H334 677 aaPredicted RBP13.08□□□□□ -0.32
SNU13-207ENST00000469522 MED24O75448 989 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 GLP2RO95838 553 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 RFC5P40937 340 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 PHKA2P46019 1235 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 RARRES1P49788 294 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 POLGP54098 1239 aaPredicted RBP13.07□□□□□ -0.32
SNU13-207ENST00000469522 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
SNU13-207ENST00000469522 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
SNU13-207ENST00000469522 ZNF174Q15697 407 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 ECM1Q16610 540 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 NAALADL2Q58DX5 795 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 XKR9Q5GH70 373 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 FERMT3Q86UX7 667 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 HELQQ8TDG4 1101 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
SNU13-207ENST00000469522 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 FSCN2O14926 492 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 FGF18O76093 207 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 SRGAP2CP0DJJ0 459 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 ZSCAN20P17040 1043 aaPredicted RBP13.06□□□□□ -0.32
SNU13-207ENST00000469522 U2AF2P26368 475 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNU13-207ENST00000469522 AFF1P51825 1210 aaKnown RBP13.06□□□□□ -0.32
SNU13-207ENST00000469522 CAPSQ13938 189 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 RABEP1Q15276 862 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 AMHR2Q16671 573 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 TMEM173Q86WV6 379 aaPredicted RBP13.06□□□□□ -0.32
SNU13-207ENST00000469522 CATSPER3Q86XQ3 398 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 RNF169Q8NCN4 708 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 VN1R2Q8NFZ6 395 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 PSPC1Q8WXF1 523 aaKnown RBP13.06□□□□□ -0.32
SNU13-207ENST00000469522 SLC7A3Q8WY07 619 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 CHST12Q9NRB3 414 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 ANKEF1Q9NU02 776 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 CLDND1Q9NY35 253 aa13.06□□□□□ -0.32
SNU13-207ENST00000469522 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
SNU13-207ENST00000469522 ST18O60284 1047 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 EOMESO95936 686 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 SFPQP23246 707 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNU13-207ENST00000469522 GLRA2P23416 452 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 ARL2P36404 184 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 ADAM15Q13444 863 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 IL17AQ16552 155 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms