RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SSBP05455 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 PLA2G4BP0C869 781 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 PLCG1P19174 1290 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 GLRA2P23416 452 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 KRT85P78386 507 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 POU5F1BQ06416 359 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 TFDP1Q14186 410 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 RTN4RL1Q86UN2 441 aaPredicted RBP16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 HERC6Q8IVU3 1022 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 MYOCDQ8IZQ8 938 aa16.1■□□□□ 0.17
SQSTM1-205ENST00000464493 CUTAO60888 179 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 NCLP19338 710 aaKnown RBP16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 FGFR4P22455 802 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 SFPQP23246 707 aaKnown RBP eCLIP16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 PHKA2P46019 1235 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 RABGGTBP53611 331 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 C1orf186Q6ZWK4 172 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 SRGAP1Q7Z6B7 1085 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 TMCO2Q7Z6W1 182 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 ZBED2Q9BTP6 218 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 RUSC1Q9BVN2 902 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 PBX4Q9BYU1 374 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 BLOC1S4Q9NUP1 217 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
SQSTM1-205ENST00000464493 PTPRSQ13332 1948 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 DENND3A2RUS2 1198 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 GJB5O95377 273 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 PBX2P40425 430 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 ME1P48163 572 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 PTENP60484 403 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 CAPSQ13938 189 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 RAB30Q15771 203 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 RRAGBQ5VZM2 374 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 GPR153Q6NV75 609 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 CATSPER4Q7RTX7 472 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 LRRC15Q8TF66 581 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 RAD54LQ92698 747 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 KIFAP3Q92845 792 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 CHAMP1Q96JM3 812 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 ADAM2Q99965 735 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 TIPINQ9BVW5 301 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 MINDY3Q9H8M7 445 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 KCND2Q9NZV8 630 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 PCDHA11Q9Y5I1 949 aa16.08■□□□□ 0.16
SQSTM1-205ENST00000464493 TLL1O43897 1013 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 MGEA5O60502 916 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 HIP1RO75146 1068 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 UPP2O95045 317 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 GUCY2CP25092 1073 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 DNAJB2P25686 324 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 MCM6Q14566 821 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 DSC3Q14574 896 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 FAM117BQ6P1L5 589 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 IFT74Q96LB3 600 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 NFKBIZQ9BYH8 718 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 CHST12Q9NRB3 414 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 RGS18Q9NS28 235 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 C1orf112Q9NSG2 853 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 GBF1Q92538 1859 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 TCHHQ07283 1943 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 TTC3P53804 2025 aa16.07■□□□□ 0.16
SQSTM1-205ENST00000464493 LRRIQ4A6NIV6 560 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 MYOGP15173 224 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 PPP2R5AQ15172 486 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 PCBP1Q15365 356 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■□□□□ 8.3
SQSTM1-205ENST00000464493 ARSHQ5FYA8 562 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 SHC4Q6S5L8 630 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 SLC24A5Q71RS6 500 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 BSNDQ8WZ55 320 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 TIFAQ96CG3 184 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 DRC1Q96MC2 740 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 RAD9AQ99638 391 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 YBX2Q9Y2T7 364 aaKnown RBP16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 INSL6Q9Y581 213 aa16.06■□□□□ 0.16
SQSTM1-205ENST00000464493 C9IYK1 514 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 INO80B-WBP1J3KQ70 363 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 NAMPTP43490 491 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 SARSP49591 514 aaKnown RBP16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 MBTD1Q05BQ5 628 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 RAD51AP2Q09MP3 1159 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 NAALADL2Q58DX5 795 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 GPBP1Q86WP2 473 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 ZBTB8OSQ8IWT0 167 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms