RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 COL4A3BPQ9Y5P4 624 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 MUC3AQ02505 3323 aa21.15■□□□□ 0.98
COL5A1-203ENST00000460264 TNFRSF10AO00220 468 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 HOXA2O43364 376 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 LYPLA2O95372 231 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 KCNA5P22460 613 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 CAMK1Q14012 370 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 EMC2Q15006 297 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 XKR9Q5GH70 373 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 FAM184AQ8NB25 1140 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 SPPL3Q8TCT6 385 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 TMEM143Q96AN5 459 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 INO80BQ9C086 356 aaPredicted RBP21.14■□□□□ 0.97
COL5A1-203ENST00000460264 TMEM117Q9H0C3 514 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 DACT1Q9NYF0 836 aa21.14■□□□□ 0.97
COL5A1-203ENST00000460264 A0A0U1RQF3 1178 aa21.13■□□□□ 0.97
COL5A1-203ENST00000460264 POTEMA6NI47 508 aa21.13■□□□□ 0.97
COL5A1-203ENST00000460264 GAS2O43903 313 aaKnown RBP21.13■□□□□ 0.97
COL5A1-203ENST00000460264 CSPG5O95196 566 aa21.13■□□□□ 0.97
COL5A1-203ENST00000460264 DNAJB1P25685 340 aa21.13■□□□□ 0.97
COL5A1-203ENST00000460264 PRPF31Q8WWY3 499 aaKnown RBP21.13■□□□□ 0.97
COL5A1-203ENST00000460264 PSPC1Q8WXF1 523 aaKnown RBP21.13■□□□□ 0.97
COL5A1-203ENST00000460264 IFT122Q9HBG6 1241 aa21.13■□□□□ 0.97
COL5A1-203ENST00000460264 CHST12Q9NRB3 414 aa21.13■□□□□ 0.97
COL5A1-203ENST00000460264 TYW1Q9NV66 732 aaKnown RBP21.13■□□□□ 0.97
COL5A1-203ENST00000460264 ST18O60284 1047 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 ATF7P17544 494 aaPredicted RBP21.12■□□□□ 0.97
COL5A1-203ENST00000460264 LAMTOR4Q0VGL1 99 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 ORC2Q13416 577 aaPredicted RBP21.12■□□□□ 0.97
COL5A1-203ENST00000460264 LEXMQ3ZCV2 418 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 SPOUT1Q5T280 376 aaKnown RBP21.12■□□□□ 0.97
COL5A1-203ENST00000460264 ZNF598Q86UK7 904 aaKnown RBP21.12■□□□□ 0.97
COL5A1-203ENST00000460264 NOSTRINQ8IVI9 506 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 RNF169Q8NCN4 708 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 PABPC5Q96DU9 382 aaKnown RBP21.12■□□□□ 0.97
COL5A1-203ENST00000460264 CASD1Q96PB1 797 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 CWH43Q9H720 699 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
COL5A1-203ENST00000460264 AAASQ9NRG9 546 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 PCDHB12Q9Y5F1 795 aa21.12■□□□□ 0.97
COL5A1-203ENST00000460264 HYAL1Q12794 435 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 CLLU1OSQ5K130 101 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 CATSPER4Q7RTX7 472 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 COLGALT1Q8NBJ5 622 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 POF1BQ8WVV4 589 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 TCP11Q8WWU5 503 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 MTRQ99707 1265 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 TRAIPQ9BWF2 469 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 XPNPEP1Q9NQW7 623 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 ANKEF1Q9NU02 776 aa21.11■□□□□ 0.97
COL5A1-203ENST00000460264 PIN4Q9Y237 131 aaKnown RBP21.11■□□□□ 0.97
COL5A1-203ENST00000460264 EOMESO95936 686 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 OR52Z1P0C646 297 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 LAG3P18627 525 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 PHKA2P46019 1235 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 GNL2Q13823 731 aaKnown RBP21.1■□□□□ 0.97
COL5A1-203ENST00000460264 ZNF174Q15697 407 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 TTC38Q5R3I4 469 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 LRRC55Q6ZSA7 311 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 FERMT3Q86UX7 667 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 ABI1Q8IZP0 508 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 LRRC43Q8N309 656 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 AGPAT5Q9NUQ2 364 aa21.1■□□□□ 0.97
COL5A1-203ENST00000460264 CD2BP2O95400 341 aaKnown RBP21.09■□□□□ 0.97
COL5A1-203ENST00000460264 SRGAP2CP0DJJ0 459 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 IRS1P35568 1242 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 TRAPPC10P48553 1259 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 RARRES1P49788 294 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 CSPP1Q1MSJ5 1256 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 CTC1Q2NKJ3 1217 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 TWF2Q6IBS0 349 aaKnown RBP21.09■□□□□ 0.97
COL5A1-203ENST00000460264 SRGAP1Q7Z6B7 1085 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 RNF149Q8NC42 400 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.09■□□□□ 0.97
COL5A1-203ENST00000460264 HELQQ8TDG4 1101 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 MINDY3Q9H8M7 445 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 CLDND1Q9NY35 253 aa21.09■□□□□ 0.97
COL5A1-203ENST00000460264 H3BQ06 376 aaPredicted RBP21.08■□□□□ 0.97
COL5A1-203ENST00000460264 ASAP2O43150 1006 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 NCK2O43639 380 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 DGAT1O75907 488 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 FGF18O76093 207 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 SPATA31C1P0DKV0 1188 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 U2AF2P26368 475 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL5A1-203ENST00000460264 UBE3AQ05086 875 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 EP400NLQ6ZTU2 488 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 THNSL1Q8IYQ7 743 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 PIGOQ8TEQ8 1089 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 TMX3Q96JJ7 454 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 CCDC43Q96MW1 224 aaKnown RBP21.08■□□□□ 0.97
COL5A1-203ENST00000460264 TUFT1Q9NNX1 390 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 FAM105AQ9NUU6 356 aa21.08■□□□□ 0.97
COL5A1-203ENST00000460264 NOL7Q9UMY1 257 aaKnown RBP21.08■□□□□ 0.97
COL5A1-203ENST00000460264 SKIP12755 728 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 GTF2F1P35269 517 aaKnown RBP eCLIP21.07■□□□□ 0.96
COL5A1-203ENST00000460264 LTBRP36941 435 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 TECP42680 631 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 MXD4Q14582 209 aaPredicted RBP21.07■□□□□ 0.96
COL5A1-203ENST00000460264 NBR1Q14596 966 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms