RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 RNF149Q8NC42 400 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 TOP1MTQ969P6 601 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 SAMD11Q96NU1 681 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 FDXACB1Q9BRP7 624 aaPredicted RBP13.58□□□□□ -0.23
LTBR-204ENST00000444814 PYM1Q9BRP8 204 aaKnown RBP13.58□□□□□ -0.23
LTBR-204ENST00000444814 PBX4Q9BYU1 374 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 CCSER1Q9C0I3 900 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 POLR3FQ9H1D9 316 aaPredicted RBP13.58□□□□□ -0.23
LTBR-204ENST00000444814 AGO3Q9H9G7 860 aaKnown RBP13.58□□□□□ -0.23
LTBR-204ENST00000444814 C17orf75Q9HAS0 396 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 PCDH10Q9P2E7 1040 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 RWDD3Q9Y3V2 267 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 PCDHB7Q9Y5E2 793 aa13.58□□□□□ -0.23
LTBR-204ENST00000444814 CARNS1A5YM72 827 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 H0YCG3 227 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 ENPP3O14638 875 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 SPTLC2O15270 562 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
LTBR-204ENST00000444814 SCP2P22307 547 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 ABCD1P33897 745 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 SARSP49591 514 aaKnown RBP13.58□□□□□ -0.24
LTBR-204ENST00000444814 KRT85P78386 507 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 CCDC73Q6ZRK6 1079 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 FAM228AQ86W67 206 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 HACE1Q8IYU2 909 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 DEPTORQ8TB45 409 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 VWCEQ96DN2 955 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 CCDC51Q96ER9 411 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 LRCH3Q96II8 777 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 USP28Q96RU2 1077 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 ADAM2Q99965 735 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 NFKBIZQ9BYH8 718 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 ELAC1Q9H777 363 aaKnown RBP13.58□□□□□ -0.24
LTBR-204ENST00000444814 RGS18Q9NS28 235 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 BMP2KQ9NSY1 1161 aaPredicted RBP13.58□□□□□ -0.24
LTBR-204ENST00000444814 STK17AQ9UEE5 414 aa13.58□□□□□ -0.24
LTBR-204ENST00000444814 MKI67P46013 3256 aaKnown RBP13.57□□□□□ -0.24
LTBR-204ENST00000444814 LRRIQ4A6NIV6 560 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 SOX1O00570 391 aaPredicted RBP13.57□□□□□ -0.24
LTBR-204ENST00000444814 ZBTB39O15060 712 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 KRT18P05783 430 aaKnown RBP13.57□□□□□ -0.24
LTBR-204ENST00000444814 MARCKSP29966 332 aaPredicted RBP13.57□□□□□ -0.24
LTBR-204ENST00000444814 ARL2P36404 184 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 NAMPTP43490 491 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 EFNA5P52803 228 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 DMP1Q13316 513 aaPredicted RBP13.57□□□□□ -0.24
LTBR-204ENST00000444814 PTPAQ15257 358 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 IL17AQ16552 155 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 FOXD4L5Q5VV16 416 aaPredicted RBP13.57□□□□□ -0.24
LTBR-204ENST00000444814 ABI1Q8IZP0 508 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 DEFB123Q8N688 67 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 FOXD4L4Q8WXT5 416 aaPredicted RBP13.57□□□□□ -0.24
LTBR-204ENST00000444814 ZNF576Q9H609 170 aa13.57□□□□□ -0.24
LTBR-204ENST00000444814 PP2D1A8MPX8 630 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 INO80B-WBP1J3KQ70 363 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 CUTAO60888 179 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 UPP2O95045 317 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 NCLP19338 710 aaKnown RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 SMTNP53814 917 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 PTENP60484 403 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 DEFB103AP81534 67 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 DRP2Q13474 957 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 RRAGBQ5VZM2 374 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 TWF2Q6IBS0 349 aaKnown RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
LTBR-204ENST00000444814 IFNLR1Q8IU57 520 aaPredicted RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 SYT2Q8N9I0 419 aaPredicted RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 TMEM40Q8WWA1 233 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 PGBD4Q96DM1 585 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 GAS2L1Q99501 681 aaPredicted RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 CSRNP2Q9H175 543 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 NKX2-4Q9H2Z4 354 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 XPNPEP1Q9NQW7 623 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 PRMT7Q9NVM4 692 aaPredicted RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
LTBR-204ENST00000444814 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 PIN4Q9Y237 131 aaKnown RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 RBM19Q9Y4C8 960 aaKnown RBP13.56□□□□□ -0.24
LTBR-204ENST00000444814 SCN5AQ14524 2016 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
LTBR-204ENST00000444814 GRXCR1A8MXD5 290 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 E9PMD0 336 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 BRD1O95696 1058 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 EOMESO95936 686 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 GUCY2CP25092 1073 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 CDC25AP30304 524 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 ME1P48163 572 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 TMEM119Q4V9L6 283 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 FAM117BQ6P1L5 589 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 FAM173BQ6P4H8 233 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 NOTUMQ6P988 496 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 MAEAQ7L5Y9 396 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 SLC17A8Q8NDX2 589 aa13.55□□□□□ -0.24
LTBR-204ENST00000444814 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms