RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TCP11X2Q5H9J9 407 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 FAM117BQ6P1L5 589 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 SH3BP5LQ7L8J4 393 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 SIX6OS1Q8N1H7 587 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 FAM204AQ9H8W3 233 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 HAUS2Q9NVX0 235 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 SYNJ2BP-COX16A0A087WUM0 186 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 FOXN1O15353 648 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 CASP14P31944 242 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 DGKZQ13574 1117 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 TMEM132BQ14DG7 1078 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 DUOXA2Q1HG44 320 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 PPP1R2P3Q6NXS1 205 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 GLB1LQ6UWU2 654 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 C7orf25Q9BPX7 421 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 MTG1Q9BT17 334 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 COX16Q9P0S2 106 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 POLIQ9UNA4 740 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 GAS8O95995 478 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 RPLP2P05387 115 aaKnown RBP15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 RPS6KA1Q15418 735 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 FAM110CQ1W6H9 321 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 ATP11BQ9Y2G3 1177 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 NWD2Q9ULI1 1742 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 MYMKA6NI61 221 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 PDXKO00764 312 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 MSCO60682 206 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 GFPT2O94808 682 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 MYZAPP0CAP1 466 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 NAPGQ99747 312 aaPredicted RBP15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 CYP39A1Q9NYL5 469 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 TBC1D8O95759 1140 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 KRT31Q15323 416 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 ZNF560Q96MR9 790 aa15.24■□□□□ 0.03
SMARCA4-204ENST00000444061 C10orf71Q711Q0 1435 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 E7EVH7 732 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 AP3M2P53677 418 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 CALCOCO2Q13137 446 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 KRT81Q14533 505 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 SHCBP1Q8NEM2 672 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 DPF3Q92784 378 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 TRIM11Q96F44 468 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 AMFRQ9UKV5 643 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 BTNL9Q6UXG8 535 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 IGSF9BQ9UPX0 1349 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 TRAPPC3O43617 180 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 MUTP22033 750 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 KLRC1P26715 233 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 ADCYAP1R1P41586 468 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 KRT39Q6A163 491 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 NIPA1Q7RTP0 329 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 TRIM50Q86XT4 487 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 APBA2Q99767 749 aa15.23■□□□□ 0.03
SMARCA4-204ENST00000444061 CEP104O60308 925 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 ITGA4P13612 1032 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 CLCN3P51790 818 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 ZNF365Q70YC5 407 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 TSNARE1Q96NA8 513 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 SLITRK6Q9H5Y7 841 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 C17orf75Q9HAS0 396 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 RRAGDQ9NQL2 400 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 FAM217BQ9NTX9 383 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 CRYBG1Q9Y4K1 1723 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 GOLGA8SH3BPF8 625 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 FGRP09769 529 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 ZNF394Q53GI3 561 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 MYO1FO00160 1098 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 PPFIA4O75335 1185 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 KCNH2Q12809 1159 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 ATF7IP2Q5U623 682 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 PPP2R3CQ969Q6 453 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 TYW5A2RUC4 315 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 ZNF286BP0CG31 522 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 DAAM2Q86T65 1068 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 FAM133AQ8N9E0 248 aa15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 CCDC97Q96F63 343 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-204ENST00000444061 NOTUMQ6P988 496 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 SCN4BQ8IWT1 228 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 SYT2Q8N9I0 419 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 CCDC26Q8TAB7 109 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 CYP2W1Q8TAV3 490 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 RNF139Q8WU17 664 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 HPS3Q969F9 1004 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 EPN1Q9Y6I3 576 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 PLA2G6O60733 806 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 EGFRP00533 1210 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 FSCN1Q16658 493 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 OR6B2Q6IFH4 312 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 ATP8B4Q8TF62 1192 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 GLI3P10071 1580 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 DYDC1Q8WWB3 177 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 ZNF653Q96CK0 615 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms