RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 RABGGTBP53611 331 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 DSC3Q14574 896 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 KCNK18Q7Z418 384 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-206ENST00000439717 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-206ENST00000439717 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-206ENST00000439717 RNF149Q8NC42 400 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 KCNG4Q8TDN1 519 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 ASAP3Q8TDY4 903 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 LINC01599Q8WXQ3 324 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 KCND2Q9NZV8 630 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 CCDC39Q9UFE4 941 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 INSL6Q9Y581 213 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 LOXHD1Q8IVV2 1947 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
HSPG2-206ENST00000439717 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 SLC12A3P55017 1021 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 PTENP60484 403 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 NUCB2P80303 420 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 HTRA4P83105 476 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 DNM1Q05193 864 aaKnown RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 CAPSQ13938 189 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 RINT1Q6NUQ1 792 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 C1orf186Q6ZWK4 172 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 SLC24A5Q71RS6 500 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 RASSF8Q8NHQ8 419 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 ADAM2Q99965 735 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
HSPG2-206ENST00000439717 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 YBX2Q9Y2T7 364 aaKnown RBP13.1□□□□□ -0.31
HSPG2-206ENST00000439717 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 MGEA5O60502 916 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 CUTAO60888 179 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 CSDE1O75534 798 aaKnown RBP13.09□□□□□ -0.31
HSPG2-206ENST00000439717 STAG3L1P0CL83 205 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 PLCG1P19174 1290 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 NAMPTP43490 491 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 FAM189BP81408 668 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
HSPG2-206ENST00000439717 PPP2R5AQ15172 486 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 SPECC1Q5M775 1068 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 CATSPER4Q7RTX7 472 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-206ENST00000439717 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 IFT74Q96LB3 600 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 DRC1Q96MC2 740 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 PLIN2Q99541 437 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 TRAIPQ9BWF2 469 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 NKX2-4Q9H2Z4 354 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 ELAC1Q9H777 363 aaKnown RBP13.09□□□□□ -0.31
HSPG2-206ENST00000439717 C17orf75Q9HAS0 396 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 SLC28A3Q9HAS3 691 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 KCNG1Q9UIX4 513 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 RCOR1Q9UKL0 485 aa13.09□□□□□ -0.31
HSPG2-206ENST00000439717 PTPRSQ13332 1948 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 C9IYK1 514 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 UPP2O95045 317 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 SSBP05455 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
HSPG2-206ENST00000439717 CA3P07451 260 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 MYOGP15173 224 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 FGFR4P22455 802 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 AXLP30530 894 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 DDIT3P35638 169 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 KRT85P78386 507 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.32
HSPG2-206ENST00000439717 RRAGBQ5VZM2 374 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 CDCA2Q69YH5 1023 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-206ENST00000439717 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 CCDC73Q6ZRK6 1079 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 USP49Q70CQ1 688 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 ZBTB8OSQ8IWT0 167 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 DEFB123Q8N688 67 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-206ENST00000439717 RAD54LQ92698 747 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 YME1L1Q96TA2 773 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 RUSC1Q9BVN2 902 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 SEMA6BQ9H3T3 888 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 ZNF576Q9H609 170 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 MINDY3Q9H8M7 445 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 STK17AQ9UEE5 414 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 PCDHB7Q9Y5E2 793 aa13.08□□□□□ -0.32
HSPG2-206ENST00000439717 LRRIQ4A6NIV6 560 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms