RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LRRC23Q53EV4 343 aaPredicted RBP12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 BICDL1Q6ZP65 573 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 SPATA31D4Q6ZUB0 917 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 JAMLQ86YT9 394 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 CCSER1Q9C0I3 900 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 IKZF4Q9H2S9 585 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 FAM114A2Q9NRY5 505 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 KLHL14Q9P2G3 628 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 IGSF9BQ9UPX0 1349 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 SPAG7O75391 227 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 CSF1RP07333 972 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 SETSIPP0DME0 302 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 DNAJC3Q13217 504 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 DDB1Q16531 1140 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 SLC35G1Q2M3R5 365 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 NT5DC3Q86UY8 548 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 CPNE8Q86YQ8 564 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 SRRM1Q8IYB3 904 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 STK32AQ8WU08 396 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 BICD1Q96G01 975 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 C7orf25Q9BPX7 421 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 DENND2DQ9H6A0 471 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 BCAS3Q9H6U6 928 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 RHBDL2Q9NX52 303 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 ARL2BPQ9Y2Y0 163 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 ZSCAN9O15535 394 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 GFPT2O94808 682 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 UNC5CO95185 931 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 AFPP02771 609 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 ATP6V1C1P21283 382 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 STX2P32856 288 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 ZNF131P52739 623 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 EIF3BP55884 814 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 CUL3Q13618 768 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 LBRQ14739 615 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 HP1BP3Q5SSJ5 553 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 POTEAQ6S8J7 498 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 IRF2BP2Q7Z5L9 587 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 GLYCTKQ8IVS8 523 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 ALG3Q92685 438 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 NMRK1Q9NWW6 199 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 USP17L3A6NCW0 530 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 USP17L4A6NCW7 530 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 OR52Z1P0C646 297 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 CTSWP56202 376 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 POU5F1Q01860 360 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 GRB10Q13322 594 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 CCDC6Q16204 474 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 ECM1Q16610 540 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 USP17L1Q7RTZ2 530 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 KIFAP3Q92845 792 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 PGM2Q96G03 612 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 TBC1D10AQ9BXI6 508 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 TXLNGYQ9BZA5 131 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 KCNQ5Q9NR82 932 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 STX8Q9UNK0 236 aa12.16□□□□□ -0.46
SEC61A1-202ENST00000424880 SPATA31A5Q5VU36 1347 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 SPATA31A7Q8IWB4 1347 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 FAM196BA6NMK8 535 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 CYTH3O43739 400 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 FGFR1OPO95684 399 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 OAS1P00973 400 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 BRAFP15056 766 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 UBE4AQ14139 1066 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 RASIP1Q5U651 963 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 DUPD1Q68J44 220 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 VSTM1Q6UX27 236 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 ZDHHC14Q8IZN3 488 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 DTNBP1Q96EV8 351 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 CALML4Q96GE6 196 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 PLEKHG4BQ96PX9 1271 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 PFASO15067 1338 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 KIAA0391O15091 583 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 RIPK2O43353 540 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 ATP9AO75110 1047 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 PIAS1O75925 651 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 UQCRFS1P1P0C7P4 283 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 RASA1P20936 1047 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 CCNFP41002 786 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 GALCP54803 685 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 TRIM28Q13263 835 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 CAPN12Q6ZSI9 719 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 INTS8Q75QN2 995 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 SLC35G2Q8TBE7 412 aa12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 LARP4BQ92615 738 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-202ENST00000424880 IQCDQ96DY2 449 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms