RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 STXBP5LQ9Y2K9 1186 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 SAMM50Q9Y512 469 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 ATP8B3O60423 1300 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 COL11A1P12107 1806 aaPredicted RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 ZSCAN5CA6NGD5 496 aaPredicted RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 H2AFZP0C0S5 128 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 MAPTP10636 758 aaKnown RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 GGCXP38435 758 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 GALCP54803 685 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 TGFB2P61812 414 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 PPP3CAQ08209 521 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 TNIP1Q15025 636 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 TBC1D10BQ4KMP7 808 aaPredicted RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 CCDC70Q6NSX1 233 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 H2AFVQ71UI9 128 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 GLYCTKQ8IVS8 523 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 RMDN3Q96TC7 470 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 MED4Q9NPJ6 270 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 TBC1D22BQ9NU19 505 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
CTSB-203ENST00000420692 APEX2Q9UBZ4 518 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 HACL1Q9UJ83 578 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 FZD1Q9UP38 647 aa17.6■□□□□ 0.41
CTSB-203ENST00000420692 VWA5AO00534 786 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 ZBTB7AO95365 584 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 NOP2P46087 812 aaKnown RBP17.59■□□□□ 0.41
CTSB-203ENST00000420692 GMPSP49915 693 aaPredicted RBP17.59■□□□□ 0.41
CTSB-203ENST00000420692 NPEPPSP55786 919 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 MYL7Q01449 175 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 TNFAIP1Q13829 316 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 C8orf74Q6P047 294 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 PALB2Q86YC2 1186 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 MICALL2Q8IY33 904 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 PLEKHA4Q9H4M7 779 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 LARSQ9P2J5 1176 aaKnown RBP17.59■□□□□ 0.41
CTSB-203ENST00000420692 TELO2Q9Y4R8 837 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 TNFRSF8P28908 595 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 GTF2BQ00403 316 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 RPS6KA1Q15418 735 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 GLE1Q53GS7 698 aaKnown RBP17.59■□□□□ 0.41
CTSB-203ENST00000420692 PLA2G4FQ68DD2 849 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 SND1Q7KZF4 910 aaKnown RBP eCLIP17.59■□□□□ 0.418e-15■■■□□ 19.2
CTSB-203ENST00000420692 TRMT1LQ7Z2T5 733 aaKnown RBP17.59■□□□□ 0.41
CTSB-203ENST00000420692 C4orf19Q8IY42 314 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 USP38Q8NB14 1042 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 REPS2Q8NFH8 660 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 GDF3Q9NR23 364 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 INTUQ9ULD6 942 aa17.59■□□□□ 0.41
CTSB-203ENST00000420692 IGSF9BQ9UPX0 1349 aa17.58■□□□□ 0.41
CTSB-203ENST00000420692 A0A0A6YYK5 440 aaPredicted RBP17.58■□□□□ 0.4
CTSB-203ENST00000420692 FOXN3O00409 490 aaPredicted RBP17.58■□□□□ 0.4
CTSB-203ENST00000420692 KCNK3O14649 394 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 BAG6P46379 1132 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 BAATQ14032 418 aaPredicted RBP17.58■□□□□ 0.4
CTSB-203ENST00000420692 TRADDQ15628 312 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 HAUS6Q7Z4H7 955 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 C12orf56Q8IXR9 622 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.4
CTSB-203ENST00000420692 ACCSQ96QU6 501 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 KRT12Q99456 494 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 GINM1Q9NU53 330 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 TAS2R14Q9NYV8 317 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 KIAA1217Q5T5P2 1943 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 EMSYQ7Z589 1322 aa17.58■□□□□ 0.4
CTSB-203ENST00000420692 FAM170AA1A519 330 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 CES2O00748 559 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 RNF40O75150 1001 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 CARSP49589 748 aaKnown RBP17.57■□□□□ 0.4
CTSB-203ENST00000420692 ARHGAP44Q17R89 818 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 PRAMEF18Q5VWM3 479 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 NSMFQ6X4W1 530 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 ARHGEF19Q8IW93 802 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 ZKSCAN4Q969J2 545 aaPredicted RBP17.57■□□□□ 0.4
CTSB-203ENST00000420692 ST6GALNAC4Q9H4F1 302 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 DOCK1Q14185 1865 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 ESYT3A0FGR9 886 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 SLC16A4O15374 487 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 ZBED4O75132 1171 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
CTSB-203ENST00000420692 HSP90B2PQ58FF3 399 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 METTL13Q8N6R0 699 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 SCFD2Q8WU76 684 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 ACBD3Q9H3P7 528 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 TMEM206Q9H813 350 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 OSGEPQ9NPF4 335 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 HSPBP1Q9NZL4 362 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 CNOT7Q9UIV1 285 aaKnown RBP17.57■□□□□ 0.4
CTSB-203ENST00000420692 DOCK5Q9H7D0 1870 aa17.57■□□□□ 0.4
CTSB-203ENST00000420692 TMCO5BA8MYB1 307 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 ADSSP30520 456 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 VAMP7P51809 220 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 NCKAP1LP55160 1127 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 PEX3P56589 373 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 BACE1P56817 501 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 KIF22Q14807 665 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 EPC2Q52LR7 807 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 ANO5Q75V66 913 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 NT5DC3Q86UY8 548 aa17.56■□□□□ 0.4
CTSB-203ENST00000420692 VPS36Q86VN1 386 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms