RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 PIK3AP1Q6ZUJ8 805 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 ANO5Q75V66 913 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 ADGRD2Q7Z7M1 963 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 ECHDC2Q86YB7 292 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 COLGALT1Q8NBJ5 622 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 KHSRPQ92945 711 aaKnown RBP eCLIP10.59□□□□□ -0.711e-7■□□□□ 8.2
NUP50-205ENST00000419387 CASD1Q96PB1 797 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 JPH2Q9BR39 696 aaPredicted RBP10.59□□□□□ -0.71
NUP50-205ENST00000419387 SH2D3AQ9BRG2 576 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 GCOM2Q9BZD3 368 aaPredicted RBP10.59□□□□□ -0.71
NUP50-205ENST00000419387 TMEM117Q9H0C3 514 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 CWH43Q9H720 699 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 VAV3Q9UKW4 847 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 WDR81Q562E7 1941 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 A0A0U1RQF3 1178 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 LINC01565O15544 149 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 CSDE1O75534 798 aaKnown RBP10.58□□□□□ -0.72
NUP50-205ENST00000419387 FGF18O76093 207 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 EOMESO95936 686 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 P4HBP07237 508 aaKnown RBP10.58□□□□□ -0.72
NUP50-205ENST00000419387 LAG3P18627 525 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 SSTR3P32745 418 aaPredicted RBP10.58□□□□□ -0.72
NUP50-205ENST00000419387 KRT2P35908 639 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 QARSP47897 775 aaKnown RBP10.58□□□□□ -0.72
NUP50-205ENST00000419387 EPHA7Q15375 998 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 EARS2Q5JPH6 523 aaKnown RBP10.58□□□□□ -0.72
NUP50-205ENST00000419387 ZNF410Q86VK4 478 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 THNSL1Q8IYQ7 743 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 EFHBQ8N7U6 833 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 HAS1Q92839 578 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 INO80BQ9C086 356 aaPredicted RBP10.58□□□□□ -0.72
NUP50-205ENST00000419387 BRMS1Q9HCU9 246 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 CYP26B1Q9NR63 512 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 CHST12Q9NRB3 414 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 RNF19AQ9NV58 838 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 DACT1Q9NYF0 836 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 SUCLA2Q9P2R7 463 aaPredicted RBP10.58□□□□□ -0.72
NUP50-205ENST00000419387 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 PRKAG3Q9UGI9 489 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 BDP1A6H8Y1 2624 aa10.58□□□□□ -0.72
NUP50-205ENST00000419387 FNDC1Q4ZHG4 1894 aaPredicted RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 A0A087WZ62 844 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 MBTPS2O43462 519 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 GPR37L1O60883 481 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 TBX10O75333 385 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 BAG4O95429 457 aaKnown RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 LARGE1O95461 756 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 NRIP1P48552 1158 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 NDUFV1P49821 464 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 NEK4P51957 841 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 NPEPPSP55786 919 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 PLCB3Q01970 1234 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 NR5A1Q13285 461 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 SMAD2Q15796 467 aaKnown RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 CLUL1Q15846 466 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 PLA2G4FQ68DD2 849 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 PDE12Q6L8Q7 609 aaKnown RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 LRRC55Q6ZSA7 311 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 RHPN2Q8IUC4 686 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 C4orf19Q8IY42 314 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 EXOC8Q8IYI6 725 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 SLFN12Q8IYM2 578 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 ABI1Q8IZP0 508 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 RNF169Q8NCN4 708 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 GTF3C6Q969F1 213 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 CEP170P1Q96L14 293 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 FDXACB1Q9BRP7 624 aaPredicted RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 LRFN3Q9BTN0 628 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 TLE6Q9H808 572 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 TLR9Q9NR96 1032 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 PUF60Q9UHX1 559 aaKnown RBP10.57□□□□□ -0.72
NUP50-205ENST00000419387 CD207Q9UJ71 328 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 PCDHB8Q9UN66 801 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 LZTS1Q9Y250 596 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 PPME1Q9Y570 386 aa10.57□□□□□ -0.72
NUP50-205ENST00000419387 ATG2AQ2TAZ0 1938 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 KIAA1671Q9BY89 1806 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 FSCN2O14926 492 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 EYA4O95677 639 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 ALADP13716 330 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 SFPQP23246 707 aaKnown RBP eCLIP10.56□□□□□ -0.72
NUP50-205ENST00000419387 ERVFC1P60507 584 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 ZP2Q05996 745 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 SMAD4Q13485 552 aaKnown RBP10.56□□□□□ -0.72
NUP50-205ENST00000419387 TMEM31Q5JXX7 168 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 CLLU1OSQ5K130 101 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 NCAPH2Q6IBW4 605 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 KCNT2Q6UVM3 1135 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 KSR1Q8IVT5 923 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 ADHFE1Q8IWW8 467 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 LRRC43Q8N309 656 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 NSUN7Q8NE18 718 aaKnown RBP10.56□□□□□ -0.72
NUP50-205ENST00000419387 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms