RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 PRKCIP41743 596 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 NCKAP1LP55160 1127 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 ALCAMQ13740 583 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 NFRKBQ6P4R8 1299 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 RDM1Q8NG50 284 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 BSNDQ8WZ55 320 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 SYT17Q9BSW7 474 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.27
LRCH3-202ENST00000414675 CNTN2Q02246 1040 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 MYBPC2Q14324 1141 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 NAB2Q15742 525 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 CREG2Q8IUH2 290 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 OLIG1Q8TAK6 271 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 PLEKHO2Q8TD55 490 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 ALS2CR12Q96Q35 445 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 INTS2Q9H0H0 1204 aaKnown RBP16.76■□□□□ 0.27
LRCH3-202ENST00000414675 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-202ENST00000414675 MYH9P35579 1960 aaKnown RBP16.76■□□□□ 0.27
LRCH3-202ENST00000414675 MYPNQ86TC9 1320 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 MAFGO15525 162 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 LRRN2O75325 713 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 VSNL1P62760 191 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 SP2Q02086 613 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 KIAA0753Q2KHM9 967 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 C1orf220Q5T0J3 134 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 SWSAP1Q6NVH7 229 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-202ENST00000414675 RNF10Q8N5U6 811 aaKnown RBP16.76■□□□□ 0.27
LRCH3-202ENST00000414675 PSMB7Q99436 277 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 TIPINQ9BVW5 301 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 TLR10Q9BXR5 811 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 JPH1Q9HDC5 661 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-202ENST00000414675 HSPBP1Q9NZL4 362 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 BTBD7Q9P203 1132 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
LRCH3-202ENST00000414675 A0A0G2JMZ2 1700 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 CCDC151A5D8V7 595 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 SPATA31C2B4DYI2 1134 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 GFPT2O94808 682 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 MYL7Q01449 175 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 BRD3Q15059 726 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 C12orf56Q8IXR9 622 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 TMEM161BQ8NDZ6 487 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 LMO3Q8TAP4 145 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 GPR88Q9GZN0 384 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 NFASCO94856 1347 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 ANKRD63C9JTQ0 380 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 F8VZ95 297 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 CXCR5P32302 372 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 PLA2G4AP47712 749 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 NPTX2P47972 431 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 NAP1L1P55209 391 aaKnown RBP16.75■□□□□ 0.27
LRCH3-202ENST00000414675 ACTR2P61160 394 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 TUBB4BP68371 445 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 PPP3CAQ08209 521 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 TXLNBQ8N3L3 684 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
LRCH3-202ENST00000414675 TMEM174Q8WUU8 243 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 CEP170P1Q96L14 293 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 OSBPL9Q96SU4 736 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 ARFGAP3Q9NP61 516 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 ADARB2Q9NS39 739 aaKnown RBP16.75■□□□□ 0.27
LRCH3-202ENST00000414675 SMARCAL1Q9NZC9 954 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 SLC9A2Q9UBY0 812 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 NAGPAQ9UK23 515 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 BZW2Q9Y6E2 419 aaKnown RBP16.75■□□□□ 0.27
LRCH3-202ENST00000414675 PFASO15067 1338 aa16.75■□□□□ 0.27
LRCH3-202ENST00000414675 CCDC169A6NNP5 214 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 PALMO75781 387 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 CKAP4Q07065 602 aaKnown RBP16.74■□□□□ 0.27
LRCH3-202ENST00000414675 DRAP1Q14919 205 aaPredicted RBP16.74■□□□□ 0.27
LRCH3-202ENST00000414675 LONRF2Q1L5Z9 754 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 ABHD15Q6UXT9 468 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 LBX2Q6XYB7 198 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 CAGE1Q8TC20 777 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 ST7Q9NRC1 585 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 EHD2Q9NZN4 543 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 EMSYQ7Z589 1322 aa16.74■□□□□ 0.27
LRCH3-202ENST00000414675 GOLGA8IPA6NC78 632 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 GOLGA8JA6NMD2 632 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.272e-7■■■■■ 33.6
LRCH3-202ENST00000414675 EVI5O60447 810 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 ADRB2P07550 413 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 PSAPP07602 524 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 ADSSP30520 456 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 VAMP7P51809 220 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 PHLDB3Q6NSJ2 640 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 ZNF771Q7L3S4 317 aaPredicted RBP16.73■□□□□ 0.27
LRCH3-202ENST00000414675 XXYLT1Q8NBI6 393 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 ATP6V0A1Q93050 837 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 FUT8Q9BYC5 575 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 STK33Q9BYT3 514 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 R3HDMLQ9H3Y0 253 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 LUC7LQ9NQ29 371 aaKnown RBP16.73■□□□□ 0.27
LRCH3-202ENST00000414675 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
LRCH3-202ENST00000414675 RNF181Q9P0P0 153 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms