RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PGPEP1Q9NXJ5 209 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 MCM9Q9NXL9 1143 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 FAM53CQ9NYF3 392 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 SUCOQ9UBS9 1254 aaKnown RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF112Q9UJU3 913 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 ZKSCAN5Q9Y2L8 839 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 PCDHB5Q9Y5E4 795 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 KCNMB2Q9Y691 235 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 DOCK1Q14185 1865 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 MYH1P12882 1939 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 BAZ2AQ9UIF9 1905 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 CCL15-CCL14A0A0B4J2E2 113 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 KLHL33A6NCF5 533 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TRIM75PA6NK02 468 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 C9IYK1 514 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 IGF2BP3O00425 579 aaKnown RBP eCLIP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 NEMP1O14524 444 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 ENC1O14682 589 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 KHNYNO15037 678 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 SPINT1O43278 529 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 CBFA2T2O43439 604 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TRPA1O75762 1119 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 MAP3K6O95382 1288 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TGFB3P10600 412 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 PYGMP11217 842 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 PTPRAP18433 802 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 POU3F2P20265 443 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 CES1P23141 567 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 CYP2C19P33261 490 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 SHMT1P34896 483 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 MAPK9P45984 424 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 ID4P47928 161 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TDO2P48775 406 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 ARSDP51689 593 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 CBX1P83916 185 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TRDNQ13061 729 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 GRB10Q13322 594 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 GTF2H3Q13889 308 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 CCL15Q16663 113 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 HIF1AQ16665 826 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 MUM1L1Q5H9M0 696 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 NOL9Q5SY16 702 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 MZT2BQ6NZ67 158 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 CWC27Q6UX04 472 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 SCYL3Q8IZE3 742 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 ACRBPQ8NEB7 543 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 BRI3BPQ8WY22 251 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 RSPH1Q8WYR4 309 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 NECAB3Q96P71 396 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TSPAN18Q96SJ8 248 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TSEN34Q9BSV6 310 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 DHX36Q9H2U1 1008 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 R3HDMLQ9H3Y0 253 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 RETREG1Q9H6L5 497 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TCF7L1Q9HCS4 588 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 DIAPH3Q9NSV4 1193 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 PI4KBQ9UBF8 816 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 HERC5Q9UII4 1024 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 SERPINB13Q9UIV8 391 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 APOBEC2Q9Y235 224 aaKnown RBP5.13□□□□□ -1.59
SF3B1-202ENST00000409915 GIT1Q9Y2X7 761 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 PCDHB14Q9Y5E9 798 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 ZHX2Q9Y6X8 837 aa5.13□□□□□ -1.59
SF3B1-202ENST00000409915 TRAV20A0A0B4J274 112 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 TTLL8A6PVC2 850 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 J3KRW8 73 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 MPHOSPH10O00566 681 aaKnown RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 CTNND1O60716 968 aaKnown RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 CILPO75339 1184 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 PAGE1O75459 146 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 PRDM1O75626 825 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 PRKD3O94806 890 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 MT-CO1P00395 513 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 GH2P01242 217 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 ASGR2P07307 311 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 ZBTB48P10074 688 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 HSPA8P11142 646 aaKnown RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 NEFHP12036 1026 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 MAP2K2P36507 400 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 CAP2P40123 477 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 TXLNAP40222 546 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 LBX1P52954 281 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 GABPAQ06546 454 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 MTA1Q13330 715 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 PPIL2Q13356 520 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 TERF2Q15554 542 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 ZYXQ15942 572 aaKnown RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 LRRFIP1Q32MZ4 808 aaKnown RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 ATP13A4Q4VNC1 1196 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 WDR45BQ5MNZ6 344 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 C12orf60Q5U649 245 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 YOD1Q5VVQ6 348 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 PEAR1Q5VY43 1037 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 HEATR6Q6AI08 1181 aaKnown RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 IGF2-ASQ6U949 168 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF771Q7L3S4 317 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 OTOP3Q7RTS5 596 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 ERO1BQ86YB8 467 aa5.12□□□□□ -1.59
SF3B1-202ENST00000409915 MYLK4Q86YV6 388 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-202ENST00000409915 OR8H2Q8N162 312 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms