RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TMEM117Q9H0C3 514 aa16.26■□□□□ 0.19
NIF3L1-205ENST00000409588 DHX33Q9H6R0 707 aaKnown RBP16.26■□□□□ 0.19
NIF3L1-205ENST00000409588 TTC12Q9H892 705 aaPredicted RBP16.26■□□□□ 0.19
NIF3L1-205ENST00000409588 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
NIF3L1-205ENST00000409588 TTC28Q96AY4 2481 aa16.26■□□□□ 0.19
NIF3L1-205ENST00000409588 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 GRM6O15303 877 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 NEMFO60524 1076 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 JAK2O60674 1132 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 SLITRK3O94933 977 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 POLGP54098 1239 aaPredicted RBP16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 POU5F1BQ06416 359 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 ABI1Q8IZP0 508 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 FBXO18Q8NFZ0 1043 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 SPPL3Q8TCT6 385 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 C8orf76Q96K31 380 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 MTMR9Q96QG7 549 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 PPP1R16BQ96T49 567 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 LXNQ9BS40 222 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 ANKEF1Q9NU02 776 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 KIF3AQ9Y496 699 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 WDR81Q562E7 1941 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
NIF3L1-205ENST00000409588 TBKBP1A7MCY6 615 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 LAG3P18627 525 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 TRAPPC10P48553 1259 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 KCNQ1P51787 676 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 MXD4Q14582 209 aaPredicted RBP16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 RABEP1Q15276 862 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 TCEAL5Q5H9L2 206 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 SPOUT1Q5T280 376 aaKnown RBP16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 FAM102BQ5T8I3 360 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 NCAPH2Q6IBW4 605 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 SRGAP1Q7Z6B7 1085 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 ECHDC2Q86YB7 292 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 TPH2Q8IWU9 490 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 FAM184AQ8NB25 1140 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 KLHL23Q8NBE8 558 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 PSPC1Q8WXF1 523 aaKnown RBP16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 TYW1Q9NV66 732 aaKnown RBP16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 LZTS1Q9Y250 596 aa16.24■□□□□ 0.19
NIF3L1-205ENST00000409588 A0A087WZ62 844 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 ST18O60284 1047 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 ZNF623O75123 536 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 ITGB1P05556 798 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 PPM1AP35813 382 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 TXKP42681 527 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 RAB27AP51159 221 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 PLCB3Q01970 1234 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 NCBP1Q09161 790 aaKnown RBP16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 CTC1Q2NKJ3 1217 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 PAN2Q504Q3 1202 aaKnown RBP16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 CCDC83Q8IWF9 413 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 DYDC2Q96IM9 177 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 KIF2CQ99661 725 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 EIF2AK1Q9BQI3 630 aaKnown RBP16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 FDXACB1Q9BRP7 624 aaPredicted RBP16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 MRPL9Q9BYD2 267 aaKnown RBP16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 STK24Q9Y6E0 443 aa16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 COL4A4P53420 1690 aaPredicted RBP16.23■□□□□ 0.19
NIF3L1-205ENST00000409588 NLRC5Q86WI3 1866 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 DGAT1O75907 488 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 KCNA5P22460 613 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 NPEPPSP55786 919 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 KRT17Q04695 432 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 DRP2Q13474 957 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 XKR9Q5GH70 373 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 ZNF598Q86UK7 904 aaKnown RBP16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 LRRC43Q8N309 656 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 PRPF31Q8WWY3 499 aaKnown RBP16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 CASD1Q96PB1 797 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 RGL1Q9NZL6 768 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 PCDHB8Q9UN66 801 aa16.22■□□□□ 0.19
NIF3L1-205ENST00000409588 TMEM150BA6NC51 233 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 GRXCR2A6NFK2 248 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 MUTP22033 750 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 PHKA2P46019 1235 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 MCM2P49736 904 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 GNL2Q13823 731 aaKnown RBP16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 CAMK1Q14012 370 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 TFDP1Q14186 410 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 CTTNQ14247 550 aaKnown RBP16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 BMS1Q14692 1282 aaKnown RBP16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 PLA2G4FQ68DD2 849 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 CATSPER4Q7RTX7 472 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 CNNM3Q8NE01 707 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 ERMNQ8TAM6 284 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 POF1BQ8WVV4 589 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 PGBD4Q96DM1 585 aa16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 CDCA3Q99618 268 aaPredicted RBP16.21■□□□□ 0.19
NIF3L1-205ENST00000409588 MTRQ99707 1265 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms