RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GGA3Q9NZ52 723 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 HYOU1Q9Y4L1 999 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 POLR2AP24928 1970 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 GRID2IPA4D2P6 1211 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 EXOC3O60645 756 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 N4BP1O75113 896 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 GYS2P54840 703 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 WDR93Q6P2C0 686 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 PLEKHO2Q8TD55 490 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 LRRIQ3A6PVS8 624 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 SP4Q02446 784 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 TMEM132BQ14DG7 1078 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 DBR1Q9UK59 544 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 NENFQ9UMX5 172 aa16.55■□□□□ 0.24
SCAMP4-202ENST00000409472 GTPBP10A4D1E9 387 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 F8VZ95 297 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 DDX3XO00571 662 aaKnown RBP eCLIP16.54■□□□□ 0.247e-10■■■□□ 17.7
SCAMP4-202ENST00000409472 SOCS7O14512 581 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 TRIM66O15016 1216 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 SLC16A4O15374 487 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 BFSP1Q12934 665 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 KCTD19Q17RG1 926 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 ANO5Q75V66 913 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 SPATA4Q8NEY3 305 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 LNX1Q8TBB1 728 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 LRRC1Q9BTT6 524 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 MKNK1Q9BUB5 465 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 INTS2Q9H0H0 1204 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■■■■ 64.1
SCAMP4-202ENST00000409472 FRMD4BQ9Y2L6 1034 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 RRP15Q9Y3B9 282 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 PCDHGC5Q9Y5F6 944 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 WDR90Q96KV7 1748 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
SCAMP4-202ENST00000409472 EVI5O60447 810 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PLS3P13797 630 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PRKCIP41743 596 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PEX3P56589 373 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 MYL7Q01449 175 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 TBC1D22BQ9NU19 505 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 DMGDHQ9UI17 866 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 ARID2Q68CP9 1835 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 ZNF862O60290 1169 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 SLC7A5Q01650 507 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PPP3CAQ08209 521 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 CASP8Q14790 479 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 C1orf220Q5T0J3 134 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 STXBP4Q6ZWJ1 553 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PALB2Q86YC2 1186 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 RNF10Q8N5U6 811 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 BSNDQ8WZ55 320 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 RBM12Q9NTZ6 932 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 PSD3Q9NYI0 1048 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 FBXL5Q9UKA1 691 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 DNAJC12Q9UKB3 198 aa16.53■□□□□ 0.24
SCAMP4-202ENST00000409472 GOLGA8IPA6NC78 632 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 GOLGA8JA6NMD2 632 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 LYPLA2O95372 231 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 NR3C2P08235 984 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 DRAP1Q14919 205 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 TTC31Q49AM3 519 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 XKR9Q5GH70 373 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 FAM102BQ5T8I3 360 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 PHLDB3Q6NSJ2 640 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 ALKBH5Q6P6C2 394 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 HAUS6Q7Z4H7 955 aa16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-202ENST00000409472 WDR64B1ANS9 1081 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 PPP1R12BO60237 982 aaPredicted RBP16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 ERLIN1O75477 346 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 ADRB2P07550 413 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 PRLRP16471 622 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 TCP1P17987 556 aaKnown RBP16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 DSG3P32926 999 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 RNASE9P60153 205 aaKnown RBP16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 FSTL1Q12841 308 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 VSIG10LQ86VR7 867 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 LMO3Q8TAP4 145 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 ELMO3Q96BJ8 720 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 KLRG1Q96E93 195 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 FAM84AQ96KN4 292 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 GINM1Q9NU53 330 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 PCNTO95613 3336 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 EMSYQ7Z589 1322 aa16.52■□□□□ 0.23
SCAMP4-202ENST00000409472 TMCO5BA8MYB1 307 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 IVLP07476 585 aa16.51■□□□□ 0.23
SCAMP4-202ENST00000409472 PSMC5P62195 406 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms