RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ANKRD42Q8N9B4 389 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 LNX1Q8TBB1 728 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 SYN2Q92777 582 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 CBWD1Q9BRT8 395 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 GLIS2Q9BZE0 524 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 NYAP2Q9P242 653 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 PNMA2Q9UL42 364 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.22
PPP4R1-202ENST00000400555 CTNND1O60716 968 aaKnown RBP13.71□□□□□ -0.22
PPP4R1-202ENST00000400555 FGFR4P22455 802 aa13.71□□□□□ -0.22
PPP4R1-202ENST00000400555 TNIP1Q15025 636 aa13.71□□□□□ -0.22
PPP4R1-202ENST00000400555 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.22
PPP4R1-202ENST00000400555 CD2APQ9Y5K6 639 aa13.71□□□□□ -0.22
PPP4R1-202ENST00000400555 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.22
PPP4R1-202ENST00000400555 CYP26A1O43174 497 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 LMNB1P20700 586 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 NPEPPSP55786 919 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 XKR9Q5GH70 373 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 HHIPL2Q6UWX4 724 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 COL23A1Q86Y22 540 aaPredicted RBP13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 SIAH1Q8IUQ4 282 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 C18orf8Q96DM3 657 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 NACC1Q96RE7 527 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 TEKT3Q9BXF9 490 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 RDXP35241 583 aaKnown RBP13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 NT5C2P49902 561 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 LRRC14Q15048 493 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 DLGAP5Q15398 846 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 NLGN1Q8N2Q7 840 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 CAVIN3Q969G5 261 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 ISCUQ9H1K1 167 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 AGPAT3Q9NRZ7 376 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 PITPNM2Q9BZ72 1349 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 ACSL3O95573 720 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 BCRP11274 1271 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 PDE6BP35913 854 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 CEP55Q53EZ4 464 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 DENND2CQ68D51 928 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 KRT35Q92764 455 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
PPP4R1-202ENST00000400555 F8VZ95 297 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 SREBF1P36956 1147 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 PRELPP51888 382 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 C1orf54Q8WWF1 131 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 HEMGNQ9BXL5 484 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 TMEM39BQ9GZU3 492 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 TBK1Q9UHD2 729 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 TRAF3IP3Q9Y228 551 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 ALG6Q9Y672 507 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 ADRA2BP18089 450 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 PTGISQ16647 500 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 COBLL1Q53SF7 1204 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 HP1BP3Q5SSJ5 553 aaPredicted RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 SEL1L2Q5TEA6 688 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 LARGE2Q8N3Y3 721 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 PI4K2AQ9BTU6 479 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 WDR11Q9BZH6 1224 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 LARSQ9P2J5 1176 aaKnown RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 HMGB1P1B2RPK0 211 aaPredicted RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 RGS16O15492 202 aaPredicted RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 ACTN3Q08043 901 aaPredicted RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 ZNF653Q96CK0 615 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 THOC1Q96FV9 657 aaKnown RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 EPN3Q9H201 632 aa13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 DBR1Q9UK59 544 aaKnown RBP13.69□□□□□ -0.22
PPP4R1-202ENST00000400555 GAP43P17677 238 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 NF2P35240 595 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 ZNF844Q08AG5 666 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 C15orf52Q6ZUT6 534 aaKnown RBP13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 OTOP1Q7RTM1 612 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 NT5DC3Q86UY8 548 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 LDHDQ86WU2 507 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 MYCBPAPQ8TBZ2 947 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 RFFLQ8WZ73 363 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 LENG9Q96B70 501 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 MASTLQ96GX5 879 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 LRRC4CQ9HCJ2 640 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 RAVER2Q9HCJ3 691 aaKnown RBP13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 ERVK-5Q9HDB9 667 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 SPIRE1Q08AE8 756 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 CUL1Q13616 776 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 KIAA1755Q5JYT7 1200 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 DAB2IPQ5VWQ8 1189 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 PHLDB3Q6NSJ2 640 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 UBL4BQ8N7F7 174 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 FBXO25Q8TCJ0 367 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 CERKQ8TCT0 537 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 STK33Q9BYT3 514 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms