RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TP53P04637 393 aaPredicted RBP5.79□□□□□ -1.48
GABPB1-204ENST00000396464 KCNA6P17658 529 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 SMARCA1P28370 1054 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 GALNSP34059 522 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 HOXD12P35452 270 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 PMS1P54277 932 aaKnown RBP5.79□□□□□ -1.48
GABPB1-204ENST00000396464 SESN3P58005 492 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 GRM1Q13255 1194 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 SLC45A4Q5BKX6 768 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 ATAT1Q5SQI0 421 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 C4orf50Q6ZRC1 276 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 PDZD4Q76G19 769 aaPredicted RBP5.79□□□□□ -1.48
GABPB1-204ENST00000396464 DDX53Q86TM3 631 aaKnown RBP5.79□□□□□ -1.48
GABPB1-204ENST00000396464 C11orf74Q86VG3 221 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 CMIPQ8IY22 773 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 C7orf61Q8IZ16 206 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 ZNF655Q8N720 491 aaPredicted RBP5.79□□□□□ -1.48
GABPB1-204ENST00000396464 DAGLBQ8NCG7 672 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 SIGLEC10Q96LC7 697 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 FGD4Q96M96 766 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 GTPBP4Q9BZE4 634 aaKnown RBP5.79□□□□□ -1.48
GABPB1-204ENST00000396464 FOXP3Q9BZS1 431 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 KLHL25Q9H0H3 589 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 VPS45Q9NRW7 570 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 MRGBPQ9NV56 204 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 TCFL5Q9UL49 500 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 TIPRLO75663 272 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 HNRNPCP07910 306 aaKnown RBP eCLIP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 KIR2DL1P43626 348 aaPredicted RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 KIR2DL2P43627 348 aaPredicted RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 BLMHQ13867 455 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ACAP2Q15057 778 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 CLUL1Q15846 466 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ERICH6BQ5W0A0 696 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ITPRIPL1Q6GPH6 555 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 BRINP3Q76B58 766 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ASXL2Q76L83 1435 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 NLRX1Q86UT6 975 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 GRAMD1CQ8IYS0 662 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ZNF713Q8N859 430 aaPredicted RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 SLC5A5Q92911 643 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 USP13Q92995 863 aaPredicted RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 HPS3Q969F9 1004 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 RSRC1Q96IZ7 334 aaKnown RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 MAP6Q96JE9 813 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ZMAT2Q96NC0 199 aaKnown RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.78□□□□□ -1.483e-8■□□□□ 8.9
GABPB1-204ENST00000396464 CERS4Q9HA82 394 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 HELLSQ9NRZ9 838 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 IFT80Q9P2H3 777 aaPredicted RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.78□□□□□ -1.48
GABPB1-204ENST00000396464 EBF1Q9UH73 591 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ZKSCAN5Q9Y2L8 839 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 PCDHA9Q9Y5H5 950 aa5.78□□□□□ -1.48
GABPB1-204ENST00000396464 ANKRD18BA2A2Z9 1011 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 EIF3FO00303 357 aaPredicted RBP5.77□□□□□ -1.49
GABPB1-204ENST00000396464 TRAF5O00463 557 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 RGS13O14921 159 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 MAFKO60675 156 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 TUSC2O75896 110 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 SYPP08247 313 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 PI3P19957 117 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 TNFSF4P23510 183 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 PEX2P28328 305 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 ARL4AP40617 200 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 PIK3CAP42336 1068 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 FXR1P51114 621 aaKnown RBP eCLIP5.77□□□□□ -1.49
GABPB1-204ENST00000396464 KPNA1P52294 538 aaPredicted RBP5.77□□□□□ -1.49
GABPB1-204ENST00000396464 OCRLQ01968 901 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 CACNB2Q08289 660 aaPredicted RBP5.77□□□□□ -1.49
GABPB1-204ENST00000396464 NEXNQ0ZGT2 675 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 SSPNQ14714 243 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 NFIXQ14938 502 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 DDB1Q16531 1140 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 SLC10A5Q5PT55 438 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 KRT78Q8N1N4 520 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 USHBP1Q8N6Y0 703 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 SHISA4Q96DD7 197 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 TCTN2Q96GX1 697 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 MRGPRX3Q96LB0 322 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 C20orf173Q96LM9 149 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 SLC6A18Q96N87 628 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 CHCHD6Q9BRQ6 235 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 TTLL2Q9BWV7 592 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 TMEM60Q9H2L4 133 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 PLEKHA5Q9HAU0 1116 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 GCM1Q9NP62 436 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 DMRT3Q9NQL9 472 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 ZNF652Q9Y2D9 606 aa5.77□□□□□ -1.49
GABPB1-204ENST00000396464 PABPN1LA6NDY0 278 aaKnown RBP5.76□□□□□ -1.49
GABPB1-204ENST00000396464 SMTNL1A8MU46 457 aa5.76□□□□□ -1.49
GABPB1-204ENST00000396464 HRKO00198 91 aa5.76□□□□□ -1.49
GABPB1-204ENST00000396464 ABLIM1O14639 778 aa5.76□□□□□ -1.49
GABPB1-204ENST00000396464 NCK2O43639 380 aa5.76□□□□□ -1.49
GABPB1-204ENST00000396464 VAMP4O75379 141 aa5.76□□□□□ -1.49
GABPB1-204ENST00000396464 IGHDP01880 384 aa5.76□□□□□ -1.49
GABPB1-204ENST00000396464 ATP2A2P16615 1042 aaKnown RBP5.76□□□□□ -1.49
GABPB1-204ENST00000396464 SYN1P17600 705 aa5.76□□□□□ -1.49
GABPB1-204ENST00000396464 XPAP23025 273 aaPredicted RBP5.76□□□□□ -1.49
GABPB1-204ENST00000396464 PIK3CBP42338 1070 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms