RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 SEPT9Q9UHD8 586 aaPredicted RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 SMG5Q9UPR3 1016 aaKnown RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 A0A1W2PQJ5 194 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 HSPA4LO95757 839 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 KRT10P13645 584 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 SLC16A2P36021 539 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 KIAA1755Q5JYT7 1200 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 BZW1Q7L1Q6 419 aaKnown RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 CNPY4Q8N129 248 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 RIN2Q8WYP3 895 aaPredicted RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 SGSM3Q96HU1 749 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 RNPC3Q96LT9 517 aaKnown RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 FAM193BQ96PV7 902 aaPredicted RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 GNGT2O14610 69 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 TLR3O15455 904 aaKnown RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 GDF11O95390 407 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 MECOMQ03112 1051 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 TRIM59Q8IWR1 403 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 SLC40A1Q9NP59 571 aa18.37■□□□□ 0.53
SIN3A-203ENST00000394949 GEMIN8Q9NWZ8 242 aaKnown RBP18.37■□□□□ 0.53
SIN3A-203ENST00000394949 MCF2P10911 925 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 RXRBP28702 533 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 LRRC14Q15048 493 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 TRPM8Q7Z2W7 1104 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 DNAAF3Q8N9W5 541 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 NOA1Q8NC60 698 aaKnown RBP18.36■□□□□ 0.53
SIN3A-203ENST00000394949 FUCA2Q9BTY2 467 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 ADAM22Q9P0K1 906 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 PITPNM2Q9BZ72 1349 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 CYP27B1O15528 508 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 CHN1P15882 459 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 MRPS35P82673 323 aaKnown RBP18.36■□□□□ 0.53
SIN3A-203ENST00000394949 TFDP2Q14188 446 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 UBE2SQ16763 222 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 FRMD5Q7Z6J6 570 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 ZIM3Q96PE6 472 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 MOV10L1Q9BXT6 1211 aaKnown RBP18.36■□□□□ 0.53
SIN3A-203ENST00000394949 SPATA31A3Q5VYP0 1347 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 TCP11X1B4DZS4 312 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 ZNF211Q13398 564 aaPredicted RBP18.36■□□□□ 0.53
SIN3A-203ENST00000394949 SPOPLQ6IQ16 392 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 ATP11CQ8NB49 1132 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 ICA1LQ8NDH6 482 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 MLXIPLQ9NP71 852 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 SEL1LQ9UBV2 794 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 TRIM33Q9UPN9 1127 aa18.36■□□□□ 0.53
SIN3A-203ENST00000394949 CCT8L1PA6NM43 557 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 SERPINB4P48594 390 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 IFRD2Q12894 506 aaPredicted RBP18.35■□□□□ 0.53
SIN3A-203ENST00000394949 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 DCTN4Q9UJW0 460 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 NUB1Q9Y5A7 615 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 USP17L3A6NCW0 530 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 USP17L4A6NCW7 530 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 OSBPP22059 807 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 OCA2Q04671 838 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 ANKRD40Q6AI12 368 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 MIS18BP1Q6P0N0 1132 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 LRRC31Q6UY01 552 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 KDM7AQ6ZMT4 941 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 USP17L1Q7RTZ2 530 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 CATSPER1Q8NEC5 780 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 RPS6KC1Q96S38 1066 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 PPCSQ9HAB8 311 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 L1RE1Q9UN81 338 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 A2ML1A8K2U0 1454 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 KPNA7A9QM74 516 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 INO80B-WBP1J3KQ70 363 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 SORBS3O60504 671 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 GYPCP04921 128 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 MYBL1P10243 752 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 DRAP1Q14919 205 aaPredicted RBP18.35■□□□□ 0.53
SIN3A-203ENST00000394949 KIFC3Q9BVG8 833 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 INO80BQ9C086 356 aaPredicted RBP18.35■□□□□ 0.53
SIN3A-203ENST00000394949 POTEMA6NI47 508 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 RHOBTB3O94955 611 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 CDK8P49336 464 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 IGBP1P78318 339 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 RSPH3Q86UC2 560 aa18.35■□□□□ 0.53
SIN3A-203ENST00000394949 PRMT1Q99873 361 aaKnown RBP18.35■□□□□ 0.53
SIN3A-203ENST00000394949 ZNF233A6NK53 670 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 CDH16O75309 829 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 RGS9BPQ6ZS82 235 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 XXYLT1Q8NBI6 393 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 FAF2Q96CS3 445 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 DYNLL2Q96FJ2 89 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 PXDNLA1KZ92 1463 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 GRM4Q14833 912 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 HIPK4Q8NE63 616 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 FAM20AQ96MK3 541 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 ROPN1BQ9BZX4 212 aaPredicted RBP18.34■□□□□ 0.53
SIN3A-203ENST00000394949 WWP1Q9H0M0 922 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 ISCUQ9H1K1 167 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 ROPN1Q9HAT0 212 aaPredicted RBP18.34■□□□□ 0.53
SIN3A-203ENST00000394949 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 UBXN2AP68543 259 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 ERICH1Q86X53 443 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms