RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 FAF2Q96CS3 445 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 AS3MTQ9HBK9 375 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 PPARGC1AQ9UBK2 798 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 FHOD1Q9Y613 1164 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 IQGAP3Q86VI3 1631 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ZNF233A6NK53 670 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 GCFC2P16383 781 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 RFX5P48382 616 aaPredicted RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 EPHB1P54762 984 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 PSMC5P62195 406 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ST3GAL1Q11201 340 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 GRM4Q14833 912 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ANO4Q32M45 955 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 SPOPLQ6IQ16 392 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ADGRA1Q86SQ6 560 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 CCDC117Q8IWD4 279 aaPredicted RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 EFCAB13Q8IY85 973 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 PPM1NQ8N819 430 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 NSMCE1Q8WV22 266 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 CCDC124Q96CT7 223 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 PBKQ96KB5 322 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 RAB3IPQ96QF0 476 aaPredicted RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 PRMT1Q99873 361 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 CEP72Q9P209 647 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ADD3Q9UEY8 706 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 ESYT2A0FGR8 921 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 VAMP7P51809 220 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 NR1I3Q14994 352 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 SMTNL2Q2TAL5 461 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 RINT1Q6NUQ1 792 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 MIS18BP1Q6P0N0 1132 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 CCDC137Q6PK04 289 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 CLEC17AQ6ZS10 378 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ARHGEF18Q6ZSZ5 1173 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 RPAINQ86UA6 219 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 CEP120Q8N960 986 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 DEPDC1BQ8WUY9 529 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 A0A087WUV0 522 aaPredicted RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 ZBBXA8MT70 800 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 POLRMTO00411 1230 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 CLDN3O15551 220 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 PRPSAP2O60256 369 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
LTN1-202ENST00000389194 RABL6Q3YEC7 729 aaPredicted RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 C12orf60Q5U649 245 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 TRMT10CQ7L0Y3 403 aaKnown RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 SGMS1Q86VZ5 419 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ZBED8Q8IZ13 594 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 DTX3LQ8TDB6 740 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 ARL8AQ96BM9 186 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 RPS6KC1Q96S38 1066 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 REEP2Q9BRK0 252 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 PACSIN1Q9BY11 444 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 MAGEF1Q9HAY2 307 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 FBXO28Q9NVF7 368 aa5.35□□□□□ -1.55
LTN1-202ENST00000389194 MORC2Q9Y6X9 1032 aaPredicted RBP5.35□□□□□ -1.55
LTN1-202ENST00000389194 SLC37A4O43826 429 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 GPC4O75487 556 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ASPHQ12797 758 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TADA2BQ86TJ2 420 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TRIM59Q8IWR1 403 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 KIRREL3Q8IZU9 778 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ARHGAP24Q8N264 748 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ZNF579Q8NAF0 562 aaKnown RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 PDCD6IPQ8WUM4 868 aaKnown RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 INTS2Q9H0H0 1204 aaKnown RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 STK24Q9Y6E0 443 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 RPS6KA4O75676 772 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ZBED1O96006 694 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 BRAFP15056 766 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 CCND2P30279 289 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 RGS7P49802 495 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TOB1P50616 345 aaPredicted RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 TMPRSS15P98073 1019 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 EVX2Q03828 476 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 NME3Q13232 169 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 GRAMD1BQ3KR37 738 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 DCAF15Q66K64 600 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TEX2Q8IWB9 1127 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 C4orf33Q8N1A6 199 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 XXYLT1Q8NBI6 393 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 ZNF507Q8TCN5 953 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 AGAP3Q96P47 875 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 PHF20Q9BVI0 1012 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 SNX25Q9H3E2 840 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 NARFQ9UHQ1 456 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 A6NNZ2 444 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 SPECC1L-ADORA2AF8WAN1 911 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 CASQ2O14958 399 aaPredicted RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 HMGB2P26583 209 aaKnown RBP5.34□□□□□ -1.55
LTN1-202ENST00000389194 PMS2P54278 862 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TUBB8Q3ZCM7 444 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 MORC4Q8TE76 937 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 IQCDQ96DY2 449 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 YIPF3Q9GZM5 350 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 VPS11Q9H270 941 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 VCXQ9H320 206 aa5.34□□□□□ -1.55
LTN1-202ENST00000389194 TMEM206Q9H813 350 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms