RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 RBAK-RBAKDNI3L0D1 243 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 ZNF862O60290 1169 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 TACC1O75410 805 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 FMO5P49326 533 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 BMS1Q14692 1282 aaKnown RBP18.73■□□□□ 0.59
PDX1-201ENST00000381033 KCTD19Q17RG1 926 aaPredicted RBP18.73■□□□□ 0.59
PDX1-201ENST00000381033 TREML2Q5T2D2 321 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 CREG2Q8IUH2 290 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 KRT222Q8N1A0 295 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 FBXO41Q8TF61 875 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 ABCB6Q9NP58 842 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 PLCB1Q9NQ66 1216 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 TBC1D22BQ9NU19 505 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 SEL1LQ9UBV2 794 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 SUFUQ9UMX1 484 aa18.73■□□□□ 0.59
PDX1-201ENST00000381033 GOLGA8IPA6NC78 632 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 GOLGA8JA6NMD2 632 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 PJA2O43164 708 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 GFPT2O94808 682 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 FTCDO95954 541 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 LONRF2Q1L5Z9 754 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 FAM102BQ5T8I3 360 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 MS4A14Q96JA4 679 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 AS3MTQ9HBK9 375 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 ARFGAP3Q9NP61 516 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 KCND2Q9NZV8 630 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 SNX12Q9UMY4 172 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 JRKLQ9Y4A0 524 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 USP2O75604 605 aaPredicted RBP18.72■□□□□ 0.59
PDX1-201ENST00000381033 BIRC2Q13490 618 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 TUBB2AQ13885 445 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 CATSPERGQ6ZRH7 1159 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 APOBEC3FQ8IUX4 373 aaKnown RBP18.72■□□□□ 0.59
PDX1-201ENST00000381033 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 CAGE1Q8TC20 777 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 TUBB2BQ9BVA1 445 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 TLR10Q9BXR5 811 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 FUT8Q9BYC5 575 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 LARSQ9P2J5 1176 aaKnown RBP18.72■□□□□ 0.59
PDX1-201ENST00000381033 USP20Q9Y2K6 914 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 PHIPQ8WWQ0 1821 aa18.72■□□□□ 0.59
PDX1-201ENST00000381033 SPDYE16A6NNV3 312 aaPredicted RBP18.71■□□□□ 0.59
PDX1-201ENST00000381033 MATR3P43243 847 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDX1-201ENST00000381033 CNTN2Q02246 1040 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.71■□□□□ 0.59
PDX1-201ENST00000381033 HAUS6Q7Z4H7 955 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 FAM84AQ96KN4 292 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 CCDC43Q96MW1 224 aaKnown RBP18.71■□□□□ 0.59
PDX1-201ENST00000381033 NUCKS1Q9H1E3 243 aaKnown RBP18.71■□□□□ 0.59
PDX1-201ENST00000381033 ZCCHC17Q9NP64 241 aaKnown RBP18.71■□□□□ 0.59
PDX1-201ENST00000381033 CYP39A1Q9NYL5 469 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 GABBR1Q9UBS5 961 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 TCEAL9Q9UHQ7 104 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 ADAMTS5Q9UNA0 930 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 FRMD4BQ9Y2L6 1034 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 AFG3L2Q9Y4W6 797 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 PALMO75781 387 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 SP2Q02086 613 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 NEK9Q8TD19 979 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 PLEKHO2Q8TD55 490 aa18.71■□□□□ 0.59
PDX1-201ENST00000381033 ANO9A1A5B4 782 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 WDR64B1ANS9 1081 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 ADM5C9JUS6 153 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 PLS3P13797 630 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 JAM2P57087 298 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 PSMC5P62195 406 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 VGLL4Q14135 290 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 SWSAP1Q6NVH7 229 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 BSNDQ8WZ55 320 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 GDAP1L1Q96MZ0 367 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 OSBPL9Q96SU4 736 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 GINM1Q9NU53 330 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 DBR1Q9UK59 544 aaKnown RBP18.7■□□□□ 0.58
PDX1-201ENST00000381033 PPP1R12AO14974 1030 aaPredicted RBP18.7■□□□□ 0.58
PDX1-201ENST00000381033 KCNA2P16389 499 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 RNASE9P60153 205 aaKnown RBP18.7■□□□□ 0.58
PDX1-201ENST00000381033 PPP3CAQ08209 521 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 BEND6Q5SZJ8 279 aaPredicted RBP18.7■□□□□ 0.58
PDX1-201ENST00000381033 MOB2Q70IA6 237 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 NLRX1Q86UT6 975 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 GSPT2Q8IYD1 628 aaKnown RBP18.7■□□□□ 0.58
PDX1-201ENST00000381033 HDAC7Q8WUI4 952 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 RAB21Q9UL25 225 aa18.7■□□□□ 0.58
PDX1-201ENST00000381033 CCDC151A5D8V7 595 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 CCDC169A6NNP5 214 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 BFSP1Q12934 665 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 ARHGAP44Q17R89 818 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 PHLDB3Q6NSJ2 640 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDX1-201ENST00000381033 PLEKHA4Q9H4M7 779 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 MAP3K20Q9NYL2 800 aaKnown RBP18.69■□□□□ 0.58
PDX1-201ENST00000381033 TMCO5BA8MYB1 307 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 ANKRD63C9JTQ0 380 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 CALRP27797 417 aaKnown RBP18.69■□□□□ 0.58
PDX1-201ENST00000381033 CCND2P30279 289 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 GCLMP48507 274 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 CCDC60Q8IWA6 550 aaPredicted RBP18.69■□□□□ 0.58
PDX1-201ENST00000381033 GPC2Q8N158 579 aa18.69■□□□□ 0.58
PDX1-201ENST00000381033 C12orf42Q96LP6 360 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms