RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RNF10Q8N5U6 811 aaKnown RBP21.12■□□□□ 0.97
PCDH8-202ENST00000377942 ASNSD1Q9NWL6 643 aa21.12■□□□□ 0.97
PCDH8-202ENST00000377942 MAGEB2O15479 319 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 GNGT1P63211 74 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 RPS6KA2Q15349 733 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 TTC13Q8NBP0 860 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 NGRNQ9NPE2 291 aaKnown RBP21.11■□□□□ 0.97
PCDH8-202ENST00000377942 DNAAF3Q8N9W5 541 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 ARHGEF28Q8N1W1 1705 aaKnown RBP21.11■□□□□ 0.97
PCDH8-202ENST00000377942 TJP3O95049 919 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 GH1P01241 217 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 DYNLT1P63172 113 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 METTL16Q86W50 562 aaKnown RBP21.11■□□□□ 0.97
PCDH8-202ENST00000377942 FBXL13Q8NEE6 735 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 UHMK1Q8TAS1 419 aaKnown RBP21.11■□□□□ 0.97
PCDH8-202ENST00000377942 TTC1Q99614 292 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 DAGLBQ8NCG7 672 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 CFAP57Q96MR6 1250 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 ZNF560Q96MR9 790 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 KATNAL1Q9BW62 490 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 ANAPC7Q9UJX3 599 aa21.11■□□□□ 0.97
PCDH8-202ENST00000377942 SYNGAP1Q96PV0 1343 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 CCDC151A5D8V7 595 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 TROAPQ12815 778 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 RPUSD2Q8IZ73 545 aaKnown RBP21.1■□□□□ 0.97
PCDH8-202ENST00000377942 WHAMMQ8TF30 809 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 MXRA8Q9BRK3 442 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 ZFYVE28Q9HCC9 887 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 INPP5FQ9Y2H2 1132 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 KLRK1P26718 216 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 CXCR5P32302 372 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 EHD4Q9H223 541 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 ZBED1O96006 694 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 DRAP1Q14919 205 aaPredicted RBP21.1■□□□□ 0.97
PCDH8-202ENST00000377942 TTC31Q49AM3 519 aaPredicted RBP21.1■□□□□ 0.97
PCDH8-202ENST00000377942 ZNF394Q53GI3 561 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 SPATS2Q86XZ4 545 aaKnown RBP21.1■□□□□ 0.97
PCDH8-202ENST00000377942 CACNA2D3Q8IZS8 1091 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 KCNB2Q92953 911 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 DDX23Q9BUQ8 820 aaKnown RBP21.1■□□□□ 0.97
PCDH8-202ENST00000377942 ZNF18P17022 549 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 CYFIP1Q7L576 1253 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 TRIM42Q8IWZ5 723 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 RDM1Q8NG50 284 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 ZBED2Q9BTP6 218 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 POLD4Q9HCU8 107 aa21.1■□□□□ 0.97
PCDH8-202ENST00000377942 MAP2P11137 1827 aaKnown RBP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 POC1B-GALNT4F8VUJ3 575 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 RHOBTB3O94955 611 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 ZRANB2O95218 330 aaKnown RBP eCLIP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 RFC5P40937 340 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 BASP1P80723 227 aaKnown RBP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 SAMD7Q7Z3H4 446 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 RNF149Q8NC42 400 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 MORC4Q8TE76 937 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 UBE4BO95155 1302 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 MYCP01106 439 aaPredicted RBP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 MYBL1P10243 752 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 DR1Q01658 176 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 SAMD3Q8N6K7 520 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 CAPS2Q9BXY5 557 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 PODXLO00592 558 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 ASAP2O43150 1006 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 ECE1P42892 770 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 GLE1Q53GS7 698 aaKnown RBP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 ARHGEF2Q92974 986 aaKnown RBP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 TACC3Q9Y6A5 838 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 PRKCBP05771 671 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 ZNF157P51786 506 aaPredicted RBP21.09■□□□□ 0.97
PCDH8-202ENST00000377942 SAAL1Q96ER3 474 aa21.09■□□□□ 0.97
PCDH8-202ENST00000377942 FAM205CA6NFA0 338 aa21.08■□□□□ 0.97
PCDH8-202ENST00000377942 PHLDB2Q86SQ0 1253 aa21.08■□□□□ 0.97
PCDH8-202ENST00000377942 SLC8A2Q9UPR5 921 aa21.08■□□□□ 0.97
PCDH8-202ENST00000377942 SCP2P22307 547 aa21.08■□□□□ 0.97
PCDH8-202ENST00000377942 CAP2P40123 477 aa21.08■□□□□ 0.97
PCDH8-202ENST00000377942 CUL1Q13616 776 aa21.08■□□□□ 0.97
PCDH8-202ENST00000377942 MAP3K20Q9NYL2 800 aaKnown RBP21.08■□□□□ 0.97
PCDH8-202ENST00000377942 SUCLA2Q9P2R7 463 aaPredicted RBP21.08■□□□□ 0.97
PCDH8-202ENST00000377942 FDPSP14324 419 aaKnown RBP21.08■□□□□ 0.96
PCDH8-202ENST00000377942 IL1R1P14778 569 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 FXR2P51116 673 aaKnown RBP eCLIP21.08■□□□□ 0.96
PCDH8-202ENST00000377942 IL9RQ01113 521 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 C2orf54Q08AI8 447 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 GPRC5AQ8NFJ5 357 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 LRRC8CQ8TDW0 803 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 STAP1Q9ULZ2 295 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 PXDNQ92626 1479 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 EMSYQ7Z589 1322 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 FOXN1O15353 648 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 MSH2P43246 934 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 ADSSL1Q8N142 457 aa21.08■□□□□ 0.96
PCDH8-202ENST00000377942 LIMA1Q9UHB6 759 aaKnown RBP21.08■□□□□ 0.96
PCDH8-202ENST00000377942 SALL1Q9NSC2 1324 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 KPNA2P52292 529 aaKnown RBP21.07■□□□□ 0.96
PCDH8-202ENST00000377942 ASPHQ12797 758 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 PDIK1LQ8N165 341 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 RAET1EQ8TD07 263 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 DEFB132Q7Z7B7 95 aa21.07■□□□□ 0.96
PCDH8-202ENST00000377942 SCFD2Q8WU76 684 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms