RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PARP14Q460N5 1801 aa20.4■□□□□ 0.86
USP49-202ENST00000373010 C8orf74Q6P047 294 aa20.39■□□□□ 0.86
USP49-202ENST00000373010 INPP4AQ96PE3 977 aaPredicted RBP20.39■□□□□ 0.86
USP49-202ENST00000373010 ACCSQ96QU6 501 aa20.39■□□□□ 0.86
USP49-202ENST00000373010 ACBD3Q9H3P7 528 aa20.39■□□□□ 0.86
USP49-202ENST00000373010 MAP3K20Q9NYL2 800 aaKnown RBP20.39■□□□□ 0.86
USP49-202ENST00000373010 BRCA1P38398 1863 aaKnown RBP20.39■□□□□ 0.86
USP49-202ENST00000373010 A0A0U1RQG5 324 aaPredicted RBP20.39■□□□□ 0.85
USP49-202ENST00000373010 LYPLA2O95372 231 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 H2AFZP0C0S5 128 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 ANXA13P27216 316 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 NPEPPSP55786 919 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 BAATQ14032 418 aaPredicted RBP20.39■□□□□ 0.85
USP49-202ENST00000373010 HSP90B2PQ58FF3 399 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 H2AFVQ71UI9 128 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 GLYCTKQ8IVS8 523 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 LRRC57Q8N9N7 239 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 PLEKHA4Q9H4M7 779 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 RNF146Q9NTX7 359 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 GINM1Q9NU53 330 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 STIM2Q9P246 746 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 RNF14Q9UBS8 474 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
USP49-202ENST00000373010 COL11A1P12107 1806 aaPredicted RBP20.39■□□□□ 0.85
USP49-202ENST00000373010 DOCK1Q14185 1865 aa20.39■□□□□ 0.85
USP49-202ENST00000373010 SLC16A4O15374 487 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 RPS6KA1Q15418 735 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 ARHGAP44Q17R89 818 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 PHLDB3Q6NSJ2 640 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 APEX2Q9UBZ4 518 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 LRRN2O75325 713 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 KRT13P13646 458 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 HAUS6Q7Z4H7 955 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 EMSYQ7Z589 1322 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 TPCN2Q8NHX9 752 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 SLC30A5Q8TAD4 765 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 FAM71BQ8TC56 605 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 TMEM206Q9H813 350 aa20.38■□□□□ 0.85
USP49-202ENST00000373010 TMCO5BA8MYB1 307 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 KCNK3O14649 394 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 KIF4AO95239 1232 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 MAPTP10636 758 aaKnown RBP20.37■□□□□ 0.85
USP49-202ENST00000373010 PEX3P56589 373 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 BACE1P56817 501 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 PSMC5P62195 406 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 XKR9Q5GH70 373 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 C4orf19Q8IY42 314 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 LMO3Q8TAP4 145 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 TAF4BQ92750 862 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 TCEAL9Q9UHQ7 104 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 SYF2O95926 243 aaKnown RBP20.37■□□□□ 0.85
USP49-202ENST00000373010 AARSP49588 968 aaKnown RBP eCLIP20.37■□□□□ 0.85
USP49-202ENST00000373010 GALCP54803 685 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 MYBPC2Q14324 1141 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 FAM102BQ5T8I3 360 aa20.37■□□□□ 0.85
USP49-202ENST00000373010 SND1Q7KZF4 910 aaKnown RBP eCLIP20.37■□□□□ 0.85
USP49-202ENST00000373010 VAMP7P51809 220 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 PPP3CAQ08209 521 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 ALCAMQ13740 583 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 IFI16Q16666 785 aaKnown RBP20.36■□□□□ 0.85
USP49-202ENST00000373010 SCYL3Q8IZE3 742 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 SAMD3Q8N6K7 520 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 RIN2Q8WYP3 895 aaPredicted RBP20.36■□□□□ 0.85
USP49-202ENST00000373010 MED4Q9NPJ6 270 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 HSPBP1Q9NZL4 362 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 WDR64B1ANS9 1081 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 GCLMP48507 274 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 JAK3P52333 1124 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 GTF2BQ00403 316 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 PLEKHO2Q8TD55 490 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 RUBCNQ92622 972 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 WRNIP1Q96S55 665 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 KRT12Q99456 494 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 SYT11Q9BT88 431 aa20.36■□□□□ 0.85
USP49-202ENST00000373010 RLFQ13129 1914 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 ZSCAN5CA6NGD5 496 aaPredicted RBP20.35■□□□□ 0.85
USP49-202ENST00000373010 TULP1O00294 542 aaPredicted RBP20.35■□□□□ 0.85
USP49-202ENST00000373010 FOXN3O00409 490 aaPredicted RBP20.35■□□□□ 0.85
USP49-202ENST00000373010 GLI1P08151 1106 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 PTPRAP18433 802 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 HMGCS2P54868 508 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 C1orf220Q5T0J3 134 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 SNRNP48Q6IEG0 339 aaKnown RBP20.35■□□□□ 0.85
USP49-202ENST00000373010 INTS8Q75QN2 995 aaKnown RBP20.35■□□□□ 0.85
USP49-202ENST00000373010 EXOC4Q96A65 974 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 WDR81Q562E7 1941 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 KIAA1217Q5T5P2 1943 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 GOLGA8IPA6NC78 632 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 GOLGA8JA6NMD2 632 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 LMNB1P20700 586 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 KRT76Q01546 638 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 DCAF15Q66K64 600 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 ARHGEF19Q8IW93 802 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 XXYLT1Q8NBI6 393 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 ZNF280CQ8ND82 737 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 KIFC3Q9BVG8 833 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 INTUQ9ULD6 942 aa20.35■□□□□ 0.85
USP49-202ENST00000373010 NR3C2P08235 984 aa20.34■□□□□ 0.85
USP49-202ENST00000373010 SFNP31947 248 aa20.34■□□□□ 0.85
USP49-202ENST00000373010 GGCXP38435 758 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms