RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SRGAP2BP0DMP2 458 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 FGFR1P11362 822 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 GATMP50440 423 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 HYAL1Q12794 435 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 DRP2Q13474 957 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 MXD4Q14582 209 aaPredicted RBP21.1■□□□□ 0.97
TMEM53-201ENST00000372235 EARS2Q5JPH6 523 aaKnown RBP21.1■□□□□ 0.97
TMEM53-201ENST00000372235 PLA2G4FQ68DD2 849 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 TWF2Q6IBS0 349 aaKnown RBP21.1■□□□□ 0.97
TMEM53-201ENST00000372235 CATSPER4Q7RTX7 472 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 MICAL1Q8TDZ2 1067 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 C8orf76Q96K31 380 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 NLRP4Q96MN2 994 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 NECAB3Q96P71 396 aaPredicted RBP21.1■□□□□ 0.97
TMEM53-201ENST00000372235 CASD1Q96PB1 797 aa21.1■□□□□ 0.97
TMEM53-201ENST00000372235 TCF20Q9UGU0 1960 aaKnown RBP21.1■□□□□ 0.97
TMEM53-201ENST00000372235 TMEM150BA6NC51 233 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 JAK2O60674 1132 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 SEC24BO95487 1268 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 XRCC6P12956 609 aaKnown RBP eCLIP21.09■□□□□ 0.97
TMEM53-201ENST00000372235 SPIRE1Q08AE8 756 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 NCBP1Q09161 790 aaKnown RBP21.09■□□□□ 0.97
TMEM53-201ENST00000372235 CAMK1Q14012 370 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 XKR9Q5GH70 373 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 TPH2Q8IWU9 490 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 FAM178BQ8IXR5 827 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 EFHBQ8N7U6 833 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 FAM184AQ8NB25 1140 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 PGBD4Q96DM1 585 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 DYDC2Q96IM9 177 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 ZNF558Q96NG5 402 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 POP1Q99575 1024 aaKnown RBP21.09■□□□□ 0.97
TMEM53-201ENST00000372235 MTRQ99707 1265 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 SH2D3AQ9BRG2 576 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 FOXP1Q9H334 677 aaPredicted RBP21.09■□□□□ 0.97
TMEM53-201ENST00000372235 CWH43Q9H720 699 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 ANKEF1Q9NU02 776 aa21.09■□□□□ 0.97
TMEM53-201ENST00000372235 XIRP2A4UGR9 3374 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 H3BQ06 376 aaPredicted RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 DGAT1O75907 488 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 SLITRK3O94933 977 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 PHKA2P46019 1235 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 NPEPPSP55786 919 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 ADAM15Q13444 863 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 GNL2Q13823 731 aaKnown RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 TFDP1Q14186 410 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 FNDC1Q4ZHG4 1894 aaPredicted RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 ZNF598Q86UK7 904 aaKnown RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 GJD3Q8N144 294 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 RNF169Q8NCN4 708 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 MRPS27Q92552 414 aaKnown RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 ZNF668Q96K58 619 aaPredicted RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 EIF2AK1Q9BQI3 630 aaKnown RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 IGFLR1Q9H665 355 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 NGRNQ9NPE2 291 aaKnown RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 SPTBN5Q9NRC6 3674 aaKnown RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 STK39Q9UEW8 545 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 PIN4Q9Y237 131 aaKnown RBP21.08■□□□□ 0.97
TMEM53-201ENST00000372235 KIF3AQ9Y496 699 aa21.08■□□□□ 0.97
TMEM53-201ENST00000372235 ZNF623O75123 536 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 TXKP42681 527 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 ALDH7A1P49419 539 aaKnown RBP21.07■□□□□ 0.96
TMEM53-201ENST00000372235 RBM25P49756 843 aaKnown RBP21.07■□□□□ 0.96
TMEM53-201ENST00000372235 NDUFV1P49821 464 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 POU5F1BQ06416 359 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 CTTNQ14247 550 aaKnown RBP21.07■□□□□ 0.96
TMEM53-201ENST00000372235 EMC2Q15006 297 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 KCNT2Q6UVM3 1135 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 CCDC83Q8IWF9 413 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 CNNM3Q8NE01 707 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 PRPF31Q8WWY3 499 aaKnown RBP21.07■□□□□ 0.96
TMEM53-201ENST00000372235 MTMR9Q96QG7 549 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 HSD17B14Q9BPX1 270 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 TLE6Q9H808 572 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 UPF2Q9HAU5 1272 aaKnown RBP21.07■□□□□ 0.96
TMEM53-201ENST00000372235 SPG21Q9NZD8 308 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 RGL1Q9NZL6 768 aa21.07■□□□□ 0.96
TMEM53-201ENST00000372235 DAXXQ9UER7 740 aaPredicted RBP21.07■□□□□ 0.96
TMEM53-201ENST00000372235 FGFR4P22455 802 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 DNAJB1P25685 340 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 AXLP30530 894 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 SSTR3P32745 418 aaPredicted RBP21.06■□□□□ 0.96
TMEM53-201ENST00000372235 TRAPPC10P48553 1259 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 CYP4A11Q02928 519 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 LAMTOR4Q0VGL1 99 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 SMAD4Q13485 552 aaKnown RBP21.06■□□□□ 0.96
TMEM53-201ENST00000372235 GLB1LQ6UWU2 654 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 FERMT3Q86UX7 667 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 ERMNQ8TAM6 284 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 IFT122Q9HBG6 1241 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 AGPAT5Q9NUQ2 364 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 FAM105AQ9NUU6 356 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 CD207Q9UJ71 328 aa21.06■□□□□ 0.96
TMEM53-201ENST00000372235 REV3LO60673 3130 aa21.05■□□□□ 0.96
TMEM53-201ENST00000372235 FAM205CA6NFA0 338 aa21.05■□□□□ 0.96
TMEM53-201ENST00000372235 ERLIN2O94905 339 aa21.05■□□□□ 0.96
TMEM53-201ENST00000372235 SRGAP2CP0DJJ0 459 aa21.05■□□□□ 0.96
TMEM53-201ENST00000372235 ALADP13716 330 aa21.05■□□□□ 0.96
TMEM53-201ENST00000372235 IL9P15248 144 aa21.05■□□□□ 0.96
TMEM53-201ENST00000372235 LTBRP36941 435 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms