RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 DENND2DQ9H6A0 471 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 HOMER2Q9NSB8 354 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 NENFQ9UMX5 172 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 SUGT1Q9Y2Z0 365 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 KLRF2D3W0D1 207 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 LDHBP07195 334 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 HARSP12081 509 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 FOXN2P32314 431 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 RFC4P35249 363 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 MTA1Q13330 715 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 AUHQ13825 339 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 KHDC1Q4VXA5 237 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 EAPPQ56P03 285 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 TMEM63BQ5T3F8 832 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 KCTD1Q719H9 257 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 ARMC9Q7Z3E5 817 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 RBM12BQ8IXT5 1001 aaKnown RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 GATA6Q92908 595 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 RAB17Q9H0T7 212 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 TBC1D30Q9Y2I9 924 aa9.45□□□□□ -0.9
SMARCA1-203ENST00000371123 CCNFP41002 786 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 GRIA2P42262 883 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 IFI16Q16666 785 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 RNF10Q8N5U6 811 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 ENDOVQ8N8Q3 282 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 EIF1ADQ8N9N8 165 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CHCHD3Q9NX63 227 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 GRID1Q9ULK0 1009 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CCNE1P24864 410 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 YY1P25490 414 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CUL1Q13616 776 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 GIGYF2Q6Y7W6 1299 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 ACTRT1Q8TDG2 376 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 MYLK2Q9H1R3 596 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 MMADHCQ9H3L0 296 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 METTL5Q9NRN9 209 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CYP39A1Q9NYL5 469 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 USP15Q9Y4E8 981 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CNTNAP5Q8WYK1 1306 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 PCDH11YQ9BZA8 1340 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CIAO1O76071 339 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 VIMP08670 466 aaKnown RBP9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 NUDT17P0C025 328 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 TMEM266Q2M3C6 531 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CMPK2Q5EBM0 449 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 RASGEF1CQ8N431 466 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 SHKBP1Q8TBC3 707 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 STK32AQ8WU08 396 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 ADAMTS1Q9UHI8 967 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 CHKBQ9Y259 395 aa9.44□□□□□ -0.9
SMARCA1-203ENST00000371123 IGSF9BQ9UPX0 1349 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 EPHB2P29323 1055 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 CNGA1P29973 690 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 NEK3P51956 506 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 GIT2Q14161 759 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 DUPD1Q68J44 220 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 OTUD6AQ7L8S5 288 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 TMTC2Q8N394 836 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 FBXO25Q8TCJ0 367 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 NCSTNQ92542 709 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 PGM2Q96G03 612 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 NDNQ99608 321 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 DUOX1Q9NRD9 1551 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 BRWD3Q6RI45 1802 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 WFS1O76024 890 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 UFL1O94874 794 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 SCG2P13521 617 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 PLCG1P19174 1290 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 MAGEA8P43361 318 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 GTF2IP78347 998 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 TROAPQ12815 778 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 CNPY1Q3B7I2 92 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 KRT79Q5XKE5 535 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 CENPPQ6IPU0 288 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 GALNT17Q6IS24 598 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 ZNF571Q7Z3V5 609 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 PRUNE1Q86TP1 453 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 BLIDQ8IZY5 108 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 TEX9Q8N6V9 391 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 TSG101Q99816 390 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 TRIM9Q9C026 710 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.43□□□□□ -0.92e-7■■■□□ 18.3
SMARCA1-203ENST00000371123 KIF13BQ9NQT8 1826 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 LRRN2O75325 713 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 ATP6V1G1O75348 118 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 UNC5CO95185 931 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 FGFR4P22455 802 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 USP11P51784 963 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 DPY19L2Q6NUT2 758 aa9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 MYLK4Q86YV6 388 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 RBM46Q8TBY0 533 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-203ENST00000371123 SLC35B4Q969S0 331 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms