RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 HP1BP3Q5SSJ5 553 aaPredicted RBP17.02■□□□□ 0.32
COL17A1-202ENST00000369733 ARHGAP18Q8N392 663 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 FAF2Q96CS3 445 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 TTC1Q99614 292 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 WDR17Q8IZU2 1322 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 STXBP3O00186 592 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 PRPSAP1Q14558 356 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 TRPM8Q7Z2W7 1104 aa17.02■□□□□ 0.32
COL17A1-202ENST00000369733 A0A0G2JLW4 131 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 DEUP1Q05D60 604 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 FIS1Q9Y3D6 152 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 GJA3Q9Y6H8 435 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 ZCCHC11Q5TAX3 1644 aaKnown RBP17.02■□□□□ 0.31
COL17A1-202ENST00000369733 ALKQ9UM73 1620 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 A0A1W2PQJ5 194 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 SNAP25P60880 206 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 KRT17Q04695 432 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 CCNYQ8ND76 341 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 LRRN4CLQ8ND94 238 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 PNPLA7Q6ZV29 1317 aa17.02■□□□□ 0.31
COL17A1-202ENST00000369733 POTEFA5A3E0 1075 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 PRPSAP2O60256 369 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 ZBED1O96006 694 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 GRIN1Q05586 938 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 POTEGQ6S5H5 508 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 POTEEQ6S8J3 1075 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 KDM7AQ6ZMT4 941 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 DNAAF3Q8N9W5 541 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 HAUS8Q9BT25 410 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 PFASO15067 1338 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 CDHR2Q9BYE9 1310 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 CCT8L1PA6NM43 557 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 ZBTB5O15062 677 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 TDP2O95551 362 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
COL17A1-202ENST00000369733 FRMD5Q7Z6J6 570 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 MCUQ8NE86 351 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 PIGBQ92521 554 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.01■□□□□ 0.31
COL17A1-202ENST00000369733 CCND1P24385 295 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 PSMA2P25787 234 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 PDE6BP35913 854 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 ISCUQ9H1K1 167 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
COL17A1-202ENST00000369733 HPS5Q9UPZ3 1129 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 ENO4A6NNW6 628 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 MGEA5O60502 916 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 PRDX5P30044 214 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 CA8P35219 290 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 STAT2P52630 851 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 ITKQ08881 620 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 SLC7A3Q8WY07 619 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 RNF25Q96BH1 459 aaPredicted RBP17.01■□□□□ 0.31
COL17A1-202ENST00000369733 OLFM3Q96PB7 478 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 C7orf25Q9BPX7 421 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
COL17A1-202ENST00000369733 DNAJC8O75937 253 aaPredicted RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 RANBP1P43487 201 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 PEX3P56589 373 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 TFAMQ00059 246 aaKnown RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 CCDC117Q8IWD4 279 aaPredicted RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 ZBED8Q8IZ13 594 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 HSPH1Q92598 858 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 NXF1Q9UBU9 619 aaKnown RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 IZUMO3Q5VZ72 239 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 SPOPLQ6IQ16 392 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 RSBN1LQ6PCB5 846 aaPredicted RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 ERICH1Q86X53 443 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 XXYLT1Q8NBI6 393 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 DBR1Q9UK59 544 aaKnown RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 MAGED2Q9UNF1 606 aaPredicted RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 E9PCH4 1651 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L15C9J2P7 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L11C9JVI0 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L18D6R9N7 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L22D6RA61 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L17D6RBQ6 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L19D6RCP7 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L20D6RJB6 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 HSPA4LO95757 839 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L24Q0WX57 530 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 STK4Q13043 487 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 USP17L6PQ6QN14 398 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 SENP2Q9HC62 589 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 ADGRB3O60242 1522 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 PPIP5K2O43314 1243 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 LPXNO60711 386 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 EEF1B2P24534 225 aaKnown RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 EPHB1P54762 984 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 IFRD2Q12894 506 aaPredicted RBP17■□□□□ 0.31
COL17A1-202ENST00000369733 SLC44A5Q8NCS7 719 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 ANKZF1Q9H8Y5 726 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 SLC4A7Q9Y6M7 1214 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 KRT38O76015 456 aa17■□□□□ 0.31
COL17A1-202ENST00000369733 PDIA2Q13087 525 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms