RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 A0A087X0T9 212 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 SPDYE4A6NLX3 237 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 SPATA31C2B4DYI2 1134 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 P4HA2O15460 535 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 FAM228BP0C875 321 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 TCP1P17987 556 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 PEX3P56589 373 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 PTK2Q05397 1052 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 PRKG1Q13976 671 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 FAM102BQ5T8I3 360 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 UTP14CQ5TAP6 766 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 CC2D1AQ6P1N0 951 aaPredicted RBP19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 GPIHBP1Q8IV16 184 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 SULF1Q8IWU6 871 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 KRT222Q8N1A0 295 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 VTI1AQ96AJ9 217 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 STK33Q9BYT3 514 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 EPC1Q9H2F5 836 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 GABBR1Q9UBS5 961 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 ADAMTS1Q9UHI8 967 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 HYOU1Q9Y4L1 999 aa19.95■□□□□ 0.78
PDLIM7-203ENST00000359895 ERLIN1O75477 346 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 RGS20O76081 388 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 CCDC172P0C7W6 258 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 CBX1P83916 185 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 CETN1Q12798 172 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 PLA2G4FQ68DD2 849 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 ANO5Q75V66 913 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 XXYLT1Q8NBI6 393 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 CAGE1Q8TC20 777 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 HNRNPLLQ8WVV9 542 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 SPIRE2Q8WWL2 714 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 RNF181Q9P0P0 153 aa19.94■□□□□ 0.78
PDLIM7-203ENST00000359895 SLC16A4O15374 487 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 DDNO94850 711 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 ICAM3P32942 547 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 ABCD1P33897 745 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 IREB2P48200 963 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 NPEPPSP55786 919 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 DMP1Q13316 513 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 STXBP2Q15833 593 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 C9orf131Q5VYM1 1079 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 MIS18BP1Q6P0N0 1132 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 LBX2Q6XYB7 198 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 ZNF571Q7Z3V5 609 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 MCPH1Q8NEM0 835 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 INTS2Q9H0H0 1204 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 KCNG1Q9UIX4 513 aa19.93■□□□□ 0.78
PDLIM7-203ENST00000359895 TMEM150BA6NC51 233 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 TFRCP02786 760 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 PNMA6AP0CW24 399 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 MCM3P25205 808 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 SOX5P35711 763 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 VAMP7P51809 220 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 NAP1L1P55209 391 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 RTP1P59025 263 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 ITIH3Q06033 890 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 ENOX2Q16206 610 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 IFI16Q16666 785 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 KIAA0753Q2KHM9 967 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 ZNF572Q7Z3I7 529 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 RIOX2Q8IUF8 465 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 ZNF784Q8NCA9 323 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 CEP170P1Q96L14 293 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 MMS19Q96T76 1030 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 HSPBP1Q9NZL4 362 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 DNAJC12Q9UKB3 198 aa19.92■□□□□ 0.78
PDLIM7-203ENST00000359895 PMM2O15305 246 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 SRGAP2O75044 1071 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 EIF3JO75822 258 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 DGAT1O75907 488 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 STBD1O95210 358 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 TRIM49P0CI25 452 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 TRIM49CP0CI26 452 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 MCCD1P59942 119 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 ACTR2P61160 394 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 CBWD6Q4V339 395 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 CBWD3Q5JTY5 395 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 CBWD5Q5RIA9 395 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 SWSAP1Q6NVH7 229 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 ABHD15Q6UXT9 468 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 ANKRD35Q8N283 1001 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 ANKRD13CQ8N6S4 541 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 PROCA1Q8NCQ7 364 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 CAPZA3Q96KX2 299 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 NTPCRQ9BSD7 190 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 GPRC5CQ9NQ84 441 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 APEX2Q9UBZ4 518 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 SALL4Q9UJQ4 1053 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 INTUQ9ULD6 942 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 TBX20Q9UMR3 447 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 CCDC169A6NNP5 214 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 H0YCG3 227 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 ZNF862O60290 1169 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 RHOXF2BP0C7M4 288 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 MAP4K3Q8IVH8 894 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 RDH13Q8NBN7 331 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 NOA1Q8NC60 698 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 TMEM161BQ8NDZ6 487 aa19.91■□□□□ 0.78
PDLIM7-203ENST00000359895 OSBPL9Q96SU4 736 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms