RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FAM49AQ9H0Q0 323 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-203ENST00000359759 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-203ENST00000359759 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.08■□□□□ 0.32
COL18A1-203ENST00000359759 SYNGAP1Q96PV0 1343 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 DAB1O75553 588 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 KRT38O76015 456 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 PCP11498 1178 aaKnown RBP17.08■□□□□ 0.32
COL18A1-203ENST00000359759 BZW1Q7L1Q6 419 aaKnown RBP17.08■□□□□ 0.32
COL18A1-203ENST00000359759 OR9Q1Q8NGQ5 310 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 USP6NLQ92738 828 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 SLITRK6Q9H5Y7 841 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
COL18A1-203ENST00000359759 EXOC8Q8IYI6 725 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 ZCCHC17Q9NP64 241 aaKnown RBP17.08■□□□□ 0.32
COL18A1-203ENST00000359759 KIAA0232Q92628 1395 aa17.08■□□□□ 0.32
COL18A1-203ENST00000359759 ENO1P06733 434 aaKnown RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 KLHL38Q2WGJ6 581 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 DTX3LQ8TDB6 740 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 UBA6A0AVT1 1052 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 ADCY3O60266 1144 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 SERPINB2P05120 415 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 BRAFP15056 766 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 NME3Q13232 169 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 BHMT2Q9H2M3 363 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 DIS3Q9Y2L1 958 aaKnown RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 ERVV-2B6SEH9 535 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 DMC1Q14565 340 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 ASPSCR1Q9BZE9 553 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 GJB4Q9NTQ9 266 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 RCOR1Q9UKL0 485 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 FGFR4P22455 802 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 KIAA1755Q5JYT7 1200 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 TEDDM1Q5T9Z0 273 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 FAM180AQ6UWF9 173 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 SCG3Q8WXD2 468 aaKnown RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 K7ERI5 159 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 MYL3P08590 195 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 GCLMP48507 274 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 TRIM60Q495X7 471 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 CAPRIN2Q6IMN6 1127 aaKnown RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 ZNF746Q6NUN9 644 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-203ENST00000359759 KDELC2Q7Z4H8 507 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 ABHD8Q96I13 439 aa17.07■□□□□ 0.32
COL18A1-203ENST00000359759 USP27XA6NNY8 438 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 ATP11BQ9Y2G3 1177 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 PHKG2P15735 406 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 TMEM270Q6UE05 265 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 ELF1P32519 619 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 NAA30Q147X3 362 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 ADCK1Q86TW2 530 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 CCDC188H7C350 402 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 GPC5P78333 572 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 NCAPHQ15003 741 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 RNF219Q5W0B1 726 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 ANKMY2Q8IV38 441 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 OSBPL9Q96SU4 736 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 DDX47Q9H0S4 455 aaKnown RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 GOLGA8RI6L899 631 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 PRPF3O43395 683 aaKnown RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 FASTKD1Q53R41 847 aaKnown RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 SCN4BQ8IWT1 228 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 RBM41Q96IZ5 413 aaKnown RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 NDFIP2Q9NV92 336 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 CEP72Q9P209 647 aa17.06■□□□□ 0.32
COL18A1-203ENST00000359759 ADD3Q9UEY8 706 aaKnown RBP17.06■□□□□ 0.32
COL18A1-203ENST00000359759 TMCC1O94876 653 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 GUCY1A3Q02108 690 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 RESP18Q5W5W9 173 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 ZNF564Q8TBZ8 553 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-203ENST00000359759 MRPL40Q9NQ50 206 aaKnown RBP17.05■□□□□ 0.32
COL18A1-203ENST00000359759 UBE4BO95155 1302 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 SMARCA1P28370 1054 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 CIITAP33076 1130 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 CEP55Q53EZ4 464 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 OLFML2BQ68BL8 750 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 DPY19L2Q6NUT2 758 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 C1orf54Q8WWF1 131 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 MTBPQ96DY7 904 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 OLFM3Q96PB7 478 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 ASNSD1Q9NWL6 643 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 SEMA3EO15041 775 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 KDSRQ06136 332 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 NBPF20Q3BBV1 942 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 C11orf70Q9BRQ4 267 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 RUBCNLQ9H714 662 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 ARHGAP10A1A4S6 786 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 F8W8V4 182 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 WDR47O94967 919 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 KRT39Q6A163 491 aa17.05■□□□□ 0.32
COL18A1-203ENST00000359759 TAS2R42Q7RTR8 314 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms