RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 BMT2Q1RMZ1 405 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 CEP120Q8N960 986 aa18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 UTP11Q9Y3A2 253 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-201ENST00000329397 LTBP1Q14766 1721 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 ATMINO43313 823 aaPredicted RBP18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 IBSPP21815 317 aaPredicted RBP18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 GUCY2CP25092 1073 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 IFFO1Q0D2I5 559 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 LRCH2Q5VUJ6 765 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 PSMD1Q99460 953 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 NYAP2Q9P242 653 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 SNX24Q9Y343 169 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 MYH11P35749 1972 aa18.83■□□□□ 0.61
PTP4A3-201ENST00000329397 IGLV3-22A0A075B6J6 115 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 TLDC2A0PJX2 215 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 CCDC188H7C350 402 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 SLC16A3O15427 465 aaKnown RBP18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 KRT13P13646 458 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 PLTPP55058 493 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 ABCB5Q2M3G0 1257 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 MOXD1Q6UVY6 613 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 LRIG3Q6UXM1 1119 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 ZSWIM2Q8NEG5 633 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 CCDC26Q8TAB7 109 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 RNF217Q8TC41 542 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 RFFLQ8WZ73 363 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 KRT35Q92764 455 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 FAM20AQ96MK3 541 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 INTS2Q9H0H0 1204 aaKnown RBP18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 GLT8D2Q9H1C3 349 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 PI4KBQ9UBF8 816 aa18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 DDX20Q9UHI6 824 aaKnown RBP18.83■□□□□ 0.6
PTP4A3-201ENST00000329397 FOXN3O00409 490 aaPredicted RBP18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 CAND2O75155 1236 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 POU5F1Q01860 360 aaKnown RBP18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 ZYXQ15942 572 aaKnown RBP18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 KIAA1755Q5JYT7 1200 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 ODR4Q5SWX8 454 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 PHLDB3Q6NSJ2 640 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 C1orf186Q6ZWK4 172 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 FAM178BQ8IXR5 827 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 LMBR1Q8WVP7 490 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 RAPGEF5Q92565 580 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 MKL1Q969V6 931 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 FMO2Q99518 471 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 PARVGQ9HBI0 331 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 PNMA2Q9UL42 364 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 UBR3Q6ZT12 1888 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 TBX3O15119 743 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 PPP2R2AP63151 447 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 HHIPL2Q6UWX4 724 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 SYCE1Q8N0S2 351 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 C18orf8Q96DM3 657 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 FIZ1Q96SL8 496 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 HSD17B14Q9BPX1 270 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 TDRD3Q9H7E2 651 aaKnown RBP18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 PRR12Q9ULL5 1215 aa18.82■□□□□ 0.6
PTP4A3-201ENST00000329397 GMNCA6NCL1 334 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 BMP3P12645 472 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 USP8P40818 1118 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 EMC10Q5UCC4 262 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 OTOP1Q7RTM1 612 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 SLITRK6Q9H5Y7 841 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 OLFML3Q9NRN5 406 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 LTBP4Q8N2S1 1624 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 A6NNZ2 444 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 BHMG1C9JSJ3 638 aaPredicted RBP18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 TNFAIP3P21580 790 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 DR1Q01658 176 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 TUBB8Q3ZCM7 444 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 CCDC13Q8IYE1 715 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 PRPF38AQ8NAV1 312 aaKnown RBP18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 ZNF526Q8TF50 670 aaPredicted RBP18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 KAT5Q92993 513 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 STK33Q9BYT3 514 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 CEP83Q9Y592 693 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 A0A0A6YYK5 440 aaPredicted RBP18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 EXOC3O60645 756 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 MYL7Q01449 175 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 PPATQ06203 517 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 FBXO25Q8TCJ0 367 aa18.81■□□□□ 0.6
PTP4A3-201ENST00000329397 TRAPPC3O43617 180 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 RUFY4Q6ZNE9 571 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 ARFGAP2Q8N6H7 521 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 BTBD6Q96KE9 485 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 POLR3CQ9BUI4 534 aaPredicted RBP18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 APEX2Q9UBZ4 518 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 SUGT1Q9Y2Z0 365 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 PPP1R12BO60237 982 aaPredicted RBP18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 ARP10275 920 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 ADRA2BP18089 450 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 SLCO1A2P46721 670 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 ZNF720Q7Z2F6 126 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 ZDHHC14Q8IZN3 488 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 SYCP3Q8IZU3 236 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 ACER1Q8TDN7 264 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 OSBPL7Q9BZF2 842 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 CD248Q9HCU0 757 aa18.8■□□□□ 0.6
PTP4A3-201ENST00000329397 FRMD4BQ9Y2L6 1034 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms