RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 OCEL1Q9H607 264 aa17.54■□□□□ 0.4
CCDC8-201ENST00000307522 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
CCDC8-201ENST00000307522 EGFRP00533 1210 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 PCP11498 1178 aaKnown RBP17.53■□□□□ 0.4
CCDC8-201ENST00000307522 FGFR4P22455 802 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 CCNE1P24864 410 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 MEI1Q5TIA1 1274 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 NUGGCQ68CJ6 796 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 HGSNATQ68CP4 663 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 REXO1Q8N1G1 1221 aaKnown RBP17.53■□□□□ 0.4
CCDC8-201ENST00000307522 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
CCDC8-201ENST00000307522 BAP1Q92560 729 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 ITFG2Q969R8 447 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 TMEM39BQ9GZU3 492 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 ZHX3Q9H4I2 956 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 JMJD4Q9H9V9 463 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 SWAP70Q9UH65 585 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 RTN3O95197 1032 aaPredicted RBP17.53■□□□□ 0.4
CCDC8-201ENST00000307522 LRIG3Q6UXM1 1119 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 TRIM74Q86UV6 250 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 TRIM73Q86UV7 250 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 RMDN2Q96LZ7 410 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 ADAM7Q9H2U9 754 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 DNAJC17Q9NVM6 304 aaKnown RBP17.53■□□□□ 0.4
CCDC8-201ENST00000307522 SNX24Q9Y343 169 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 RPS6KL1Q9Y6S9 549 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 hCG_2014768A0A024R1R8 64 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 TTLL1O95922 423 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 CALML3P27482 149 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 ZNF211Q13398 564 aaPredicted RBP17.53■□□□□ 0.4
CCDC8-201ENST00000307522 KIAA0895Q8NCT3 520 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 RUBCNQ92622 972 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 KCNMB3Q9NPA1 279 aa17.53■□□□□ 0.4
CCDC8-201ENST00000307522 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
CCDC8-201ENST00000307522 CNGA1P29973 690 aa17.52■□□□□ 0.4
CCDC8-201ENST00000307522 PPP2R5BQ15173 497 aa17.52■□□□□ 0.4
CCDC8-201ENST00000307522 METTL13Q8N6R0 699 aa17.52■□□□□ 0.4
CCDC8-201ENST00000307522 ACER1Q8TDN7 264 aa17.52■□□□□ 0.4
CCDC8-201ENST00000307522 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
CCDC8-201ENST00000307522 GLIS2Q9BZE0 524 aaPredicted RBP17.52■□□□□ 0.4
CCDC8-201ENST00000307522 ETNK1Q9HBU6 452 aa17.52■□□□□ 0.4
CCDC8-201ENST00000307522 LY75O60449 1722 aa17.52■□□□□ 0.4
CCDC8-201ENST00000307522 A6NHS1 94 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 RGS16O15492 202 aaPredicted RBP17.52■□□□□ 0.39
CCDC8-201ENST00000307522 CCND1P24385 295 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 ATP11AP98196 1134 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 ADAM9Q13443 819 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 SLC29A2Q14542 456 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 FITM2Q8N6M3 262 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 ERGIC2Q96RQ1 377 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 PKD2L1Q9P0L9 805 aa17.52■□□□□ 0.39
CCDC8-201ENST00000307522 STAT3P40763 770 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 LACTBP83111 547 aaPredicted RBP17.51■□□□□ 0.39
CCDC8-201ENST00000307522 PRKG1Q13976 671 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 PDXDC1Q6P996 788 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 C6orf50Q9HD87 102 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 METTL5Q9NRN9 209 aaKnown RBP17.51■□□□□ 0.39
CCDC8-201ENST00000307522 HOMER3Q9NSC5 361 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 GH1P01241 217 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 FESP07332 822 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 GNAQP50148 359 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 NONOQ15233 471 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCDC8-201ENST00000307522 AADACL2Q6P093 401 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 MTA3Q9BTC8 594 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 TRIM4Q9C037 500 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 KCNK9Q9NPC2 374 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 ACTN1P12814 892 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 GABPAQ06546 454 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 SLFN13Q68D06 897 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 C15orf52Q6ZUT6 534 aaKnown RBP17.51■□□□□ 0.39
CCDC8-201ENST00000307522 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 SUPT20HQ8NEM7 779 aa17.51■□□□□ 0.39
CCDC8-201ENST00000307522 TIAM2Q8IVF5 1701 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 SMAPO00193 183 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 SLC9C1Q4G0N8 1177 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 AGBL2Q5U5Z8 902 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 ZNF449Q6P9G9 518 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 PIGWQ7Z7B1 504 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 C4orf32Q8N8J7 132 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 TTC8Q8TAM2 541 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 FMO2Q99518 471 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 ASTN2O75129 1339 aaPredicted RBP17.5■□□□□ 0.39
CCDC8-201ENST00000307522 RHOBTB3O94955 611 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 PAEPP09466 180 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 COPS2P61201 443 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 NAB2Q15742 525 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 SFMBT2Q5VUG0 894 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 RNF25Q96BH1 459 aaPredicted RBP17.5■□□□□ 0.39
CCDC8-201ENST00000307522 SEMA4AQ9H3S1 761 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
CCDC8-201ENST00000307522 A0A1W2PRG0 241 aa17.49■□□□□ 0.39
CCDC8-201ENST00000307522 AHCYL1O43865 530 aa17.49■□□□□ 0.39
CCDC8-201ENST00000307522 HIP1RO75146 1068 aa17.49■□□□□ 0.39
CCDC8-201ENST00000307522 KLHL30Q0D2K2 578 aa17.49■□□□□ 0.39
CCDC8-201ENST00000307522 ASTE1Q2TB18 679 aaPredicted RBP17.49■□□□□ 0.39
CCDC8-201ENST00000307522 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms