RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 LXNQ9BS40 222 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 DBR1Q9UK59 544 aaKnown RBP27.25■■□□□ 1.95
ROM1-201ENST00000278833 SFI1A8K8P3 1242 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 MAPK13O15264 365 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 LYPLA2O95372 231 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 ARP10275 920 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 SNRPFP62306 86 aaKnown RBP27.24■■□□□ 1.95
ROM1-201ENST00000278833 TCEAL1Q15170 157 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 DLGAP5Q15398 846 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 NT5DC3Q86UY8 548 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 RFFLQ8WZ73 363 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 ZIM3Q96PE6 472 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 INTS2Q9H0H0 1204 aaKnown RBP27.24■■□□□ 1.95
ROM1-201ENST00000278833 TAF1DQ9H5J8 278 aaPredicted RBP27.24■■□□□ 1.95
ROM1-201ENST00000278833 SLITRK6Q9H5Y7 841 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 APEX2Q9UBZ4 518 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 NFU1Q9UMS0 254 aa27.24■■□□□ 1.95
ROM1-201ENST00000278833 ZBTB12Q9Y330 459 aaPredicted RBP27.24■■□□□ 1.95
ROM1-201ENST00000278833 IPO5O00410 1097 aaKnown RBP27.23■■□□□ 1.95
ROM1-201ENST00000278833 CHMP2AO43633 222 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 NOP2P46087 812 aaKnown RBP27.23■■□□□ 1.95
ROM1-201ENST00000278833 HADHBP55084 474 aaKnown RBP27.23■■□□□ 1.95
ROM1-201ENST00000278833 BFSP1Q12934 665 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 KIF22Q14807 665 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 METTL13Q8N6R0 699 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 DNAJC12Q9UKB3 198 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 USP20Q9Y2K6 914 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 ARHGEF35A5YM69 484 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 PMM2O15305 246 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 ICAM1P05362 532 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 MYL7Q01449 175 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 ODR4Q5SWX8 454 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 GJB7Q6PEY0 223 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 DAW1Q8N136 415 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 TIPINQ9BVW5 301 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 ST6GALNAC4Q9H4F1 302 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 TMEM206Q9H813 350 aa27.23■■□□□ 1.95
ROM1-201ENST00000278833 CAP2P40123 477 aa27.22■■□□□ 1.95
ROM1-201ENST00000278833 MRPS25P82663 173 aaKnown RBP27.22■■□□□ 1.95
ROM1-201ENST00000278833 DRAP1Q14919 205 aaPredicted RBP27.22■■□□□ 1.95
ROM1-201ENST00000278833 TTMPQ5BVD1 217 aa27.22■■□□□ 1.95
ROM1-201ENST00000278833 PEX26Q7Z412 305 aa27.22■■□□□ 1.95
ROM1-201ENST00000278833 MAP3K20Q9NYL2 800 aaKnown RBP27.22■■□□□ 1.95
ROM1-201ENST00000278833 PGAP2Q9UHJ9 254 aa27.22■■□□□ 1.95
ROM1-201ENST00000278833 NOC2LQ9Y3T9 749 aaKnown RBP27.22■■□□□ 1.95
ROM1-201ENST00000278833 GALCP54803 685 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 PPATQ06203 517 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 COG2Q14746 738 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 CFAP58Q5T655 872 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 LRIG3Q6UXM1 1119 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 U2AF1L4Q8WU68 220 aaKnown RBP27.21■■□□□ 1.95
ROM1-201ENST00000278833 SEC14L1Q92503 715 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 HIP1RO75146 1068 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 CBWD6Q4V339 395 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 CBWD3Q5JTY5 395 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 CBWD5Q5RIA9 395 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 LMO3Q8TAP4 145 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 PIK3R5Q8WYR1 880 aa27.21■■□□□ 1.95
ROM1-201ENST00000278833 P4HBP07237 508 aaKnown RBP27.2■■□□□ 1.94
ROM1-201ENST00000278833 ECHS1P30084 290 aa27.2■■□□□ 1.94
ROM1-201ENST00000278833 CLUL1Q15846 466 aa27.2■■□□□ 1.94
ROM1-201ENST00000278833 INTS8Q75QN2 995 aaKnown RBP27.2■■□□□ 1.94
ROM1-201ENST00000278833 CCDC43Q96MW1 224 aaKnown RBP27.2■■□□□ 1.94
ROM1-201ENST00000278833 CLRN2A0PK11 232 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 ZBTB39O15060 712 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 CEP104O60308 925 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 FAM153BP0C7A2 387 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 GMPSP49915 693 aaPredicted RBP27.19■■□□□ 1.94
ROM1-201ENST00000278833 FAM153CQ494X1 144 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.19■■□□□ 1.94
ROM1-201ENST00000278833 ZBED3Q96IU2 234 aaPredicted RBP27.19■■□□□ 1.94
ROM1-201ENST00000278833 CAPS2Q9BXY5 557 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 LARSQ9P2J5 1176 aaKnown RBP27.19■■□□□ 1.94
ROM1-201ENST00000278833 FAM153AQ9UHL3 310 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 RRP15Q9Y3B9 282 aaKnown RBP27.19■■□□□ 1.94
ROM1-201ENST00000278833 UBIAD1Q9Y5Z9 338 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 ZNF536O15090 1300 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 GRIN2DO15399 1336 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 ZSCAN5CA6NGD5 496 aaPredicted RBP27.19■■□□□ 1.94
ROM1-201ENST00000278833 ASNSP08243 561 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 ITGB5P18084 799 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 IRAK1P51617 712 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 ERVK-9P63128 1117 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 PPP2R5EQ16537 467 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 PADI6Q6TGC4 694 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 L3MBTL3Q96JM7 780 aaPredicted RBP27.19■■□□□ 1.94
ROM1-201ENST00000278833 HINFPQ9BQA5 517 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 AMFRQ9UKV5 643 aa27.19■■□□□ 1.94
ROM1-201ENST00000278833 EIF3HO15372 352 aaKnown RBP eCLIP27.18■■□□□ 1.94
ROM1-201ENST00000278833 DHX15O43143 795 aaKnown RBP27.18■■□□□ 1.94
ROM1-201ENST00000278833 DNA2P51530 1060 aa27.18■■□□□ 1.94
ROM1-201ENST00000278833 SLC30A10Q6XR72 485 aa27.18■■□□□ 1.94
ROM1-201ENST00000278833 MIER3Q7Z3K6 550 aa27.18■■□□□ 1.94
ROM1-201ENST00000278833 MCF2L2Q86YR7 1114 aa27.18■■□□□ 1.94
ROM1-201ENST00000278833 ARL8AQ96BM9 186 aa27.18■■□□□ 1.94
ROM1-201ENST00000278833 IKZF4Q9H2S9 585 aa27.18■■□□□ 1.94
ROM1-201ENST00000278833 POLD4Q9HCU8 107 aa27.18■■□□□ 1.94
ROM1-201ENST00000278833 CYP2J2P51589 502 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 PCNX4Q63HM2 1172 aa27.17■■□□□ 1.94
ROM1-201ENST00000278833 KDM7AQ6ZMT4 941 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms