RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PRKCEQ02156 737 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 PPP3CAQ08209 521 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 KLHL30Q0D2K2 578 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 BFSP1Q12934 665 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 LMO3Q8TAP4 145 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 SPATC1LQ9H0A9 340 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 ASCC2Q9H1I8 757 aaPredicted RBP25.28■■□□□ 1.64
RAB40B-201ENST00000269347 ANKZF1Q9H8Y5 726 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 NFASCO94856 1347 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 FAM170AA1A519 330 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 PDE2AO00408 941 aaPredicted RBP25.28■■□□□ 1.64
RAB40B-201ENST00000269347 ADRB2P07550 413 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 MAPTP10636 758 aaKnown RBP25.28■■□□□ 1.64
RAB40B-201ENST00000269347 SLC39A4Q6P5W5 647 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 RIOX2Q8IUF8 465 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 CHST13Q8NET6 341 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 CCDC43Q96MW1 224 aaKnown RBP25.28■■□□□ 1.64
RAB40B-201ENST00000269347 MMS19Q96T76 1030 aa25.28■■□□□ 1.64
RAB40B-201ENST00000269347 SEC31AO94979 1220 aaKnown RBP25.27■■□□□ 1.64
RAB40B-201ENST00000269347 STXBP4Q6ZWJ1 553 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 NCAPG2Q86XI2 1143 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 FAM84AQ96KN4 292 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 ACCSQ96QU6 501 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 HSPBP1Q9NZL4 362 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 FRMD4BQ9Y2L6 1034 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 SYNGAP1Q96PV0 1343 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 CCDC169A6NNP5 214 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 NCK2O43639 380 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 GJA5P36382 358 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 CBX1P83916 185 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 SLC18A3Q16572 532 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 EEPD1Q7L9B9 569 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 SMAP1Q8IYB5 467 aaPredicted RBP25.27■■□□□ 1.64
RAB40B-201ENST00000269347 RDM1Q8NG50 284 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 CAPZA3Q96KX2 299 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 FGD4Q96M96 766 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.27■■□□□ 1.64
RAB40B-201ENST00000269347 PARD6BQ9BYG5 372 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 ST6GALNAC4Q9H4F1 302 aa25.27■■□□□ 1.64
RAB40B-201ENST00000269347 GTPBP10A4D1E9 387 aaKnown RBP25.26■■□□□ 1.63
RAB40B-201ENST00000269347 KLRC1P26715 233 aa25.26■■□□□ 1.63
RAB40B-201ENST00000269347 TAS1R3Q7RTX0 852 aa25.26■■□□□ 1.63
RAB40B-201ENST00000269347 GOLGA1Q92805 767 aa25.26■■□□□ 1.63
RAB40B-201ENST00000269347 SPAG5Q96R06 1193 aa25.26■■□□□ 1.63
RAB40B-201ENST00000269347 PNKPQ96T60 521 aa25.26■■□□□ 1.63
RAB40B-201ENST00000269347 NUCKS1Q9H1E3 243 aaKnown RBP25.26■■□□□ 1.63
RAB40B-201ENST00000269347 SEPT9Q9UHD8 586 aaPredicted RBP25.26■■□□□ 1.63
RAB40B-201ENST00000269347 PGK2P07205 417 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 IREB2P48200 963 aaKnown RBP25.25■■□□□ 1.63
RAB40B-201ENST00000269347 PPATQ06203 517 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 STXBP2Q15833 593 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 PHLDB3Q6NSJ2 640 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 PCYT2Q99447 389 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 IGSF9BQ9UPX0 1349 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 PSAPP07602 524 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 CBWD2Q8IUF1 395 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 ELMO3Q96BJ8 720 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 SAAL1Q96ER3 474 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 TBX20Q9UMR3 447 aa25.25■■□□□ 1.63
RAB40B-201ENST00000269347 EMSYQ7Z589 1322 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 SPDYE5A6NIY4 337 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 SUPT20HL2P0C7V6 817 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 POTEJP0CG39 1038 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 EPHX2P34913 555 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 TMEM63BQ5T3F8 832 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 ERO1BQ86YB8 467 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 INTS2Q9H0H0 1204 aaKnown RBP25.24■■□□□ 1.63
RAB40B-201ENST00000269347 TMEM206Q9H813 350 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.24■■□□□ 1.632e-6■■■■■ 113.6
RAB40B-201ENST00000269347 CYP26B1Q9NR63 512 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 RBPJLQ9UBG7 517 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 SAR1BQ9Y6B6 198 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 EIF3JO75822 258 aaKnown RBP25.24■■□□□ 1.63
RAB40B-201ENST00000269347 GFPT2O94808 682 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 UBA1P22314 1058 aaKnown RBP25.24■■□□□ 1.63
RAB40B-201ENST00000269347 ICAM3P32942 547 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 WHAMMP3Q1A5X7 153 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 MTERF2Q49AM1 385 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 DNERQ8NFT8 737 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 COG1Q8WTW3 980 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 RABGGTAQ92696 567 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 IWS1Q96ST2 819 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 TSGA10Q9BZW7 698 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 SMARCAL1Q9NZC9 954 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 EHD2Q9NZN4 543 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 FBXL5Q9UKA1 691 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 NENFQ9UMX5 172 aa25.24■■□□□ 1.63
RAB40B-201ENST00000269347 ZNFX1Q9P2E3 1918 aaKnown RBP25.23■■□□□ 1.63
RAB40B-201ENST00000269347 DENND3A2RUS2 1198 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 SOCS7O14512 581 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 EDNRBP24530 442 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 GCLMP48507 274 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 TTLL12Q14166 644 aaPredicted RBP25.23■■□□□ 1.63
RAB40B-201ENST00000269347 C12orf56Q8IXR9 622 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 ANKRD13AQ8IZ07 590 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 CEP112Q8N8E3 955 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 PROCA1Q8NCQ7 364 aaPredicted RBP25.23■■□□□ 1.63
RAB40B-201ENST00000269347 OPTNQ96CV9 577 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 PSMB7Q99436 277 aa25.23■■□□□ 1.63
RAB40B-201ENST00000269347 DNAJC12Q9UKB3 198 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms