RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TOR2AQ5JU69 321 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 FAM26FQ5R3K3 315 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 CARFQ8N187 725 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 WDR48Q8TAF3 677 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 GAB3Q8WWW8 586 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 AUTS2Q8WXX7 1259 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 JADE3Q92613 823 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 MBD6Q96DN6 1003 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 SPATA25Q9BR10 227 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 FDXACB1Q9BRP7 624 aaPredicted RBP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 NOL10Q9BSC4 688 aaKnown RBP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 RHOBTB2Q9BYZ6 727 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 QRSL1Q9H0R6 528 aaKnown RBP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 POLR3BQ9NW08 1133 aaPredicted RBP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 EVLQ9UI08 416 aaPredicted RBP5.97□□□□□ -1.45
CCDC54-201ENST00000261058 SCOCQ9UIL1 159 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 EDARQ9UNE0 448 aa5.97□□□□□ -1.45
CCDC54-201ENST00000261058 C9orf118A6NHY6 69 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 NPIPB6E9PJ23 425 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 RFPL1O75677 317 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 ZRANB2O95218 330 aaKnown RBP eCLIP5.96□□□□□ -1.46
CCDC54-201ENST00000261058 ADCY8P40145 1251 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 RAP1GAPP47736 663 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 SARSP49591 514 aaKnown RBP5.96□□□□□ -1.46
CCDC54-201ENST00000261058 SPIDRQ14159 915 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 Q6ZUG5 572 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 TMEM151BQ8IW70 566 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 CMTR2Q8IYT2 770 aaKnown RBP5.96□□□□□ -1.46
CCDC54-201ENST00000261058 CPA6Q8N4T0 437 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 HIST1H2AHQ96KK5 128 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 HIST1H2AJQ99878 128 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 OSBPL6Q9BZF3 934 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 L2HGDHQ9H9P8 463 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 VWA7Q9Y334 891 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 MRFAP1Q9Y605 127 aa5.96□□□□□ -1.46
CCDC54-201ENST00000261058 SLC5A3P53794 718 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 PPARAQ07869 468 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 MBNL2Q5VZF2 373 aaKnown RBP5.95□□□□□ -1.46
CCDC54-201ENST00000261058 GAREM2Q75VX8 874 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 OTOP2Q7RTS6 562 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 ZNF761Q86XN6 746 aaPredicted RBP5.95□□□□□ -1.46
CCDC54-201ENST00000261058 ADAMTS17Q8TE56 1095 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 DYDC2Q96IM9 177 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 TEKT5Q96M29 485 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 IFT122Q9HBG6 1241 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 AASDHPPTQ9NRN7 309 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 ZIM2Q9NZV7 527 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 SAE1Q9UBE0 346 aaPredicted RBP5.95□□□□□ -1.46
CCDC54-201ENST00000261058 DPP7Q9UHL4 492 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 ADAM29Q9UKF5 820 aa5.95□□□□□ -1.46
CCDC54-201ENST00000261058 ARID1BQ8NFD5 2236 aaPredicted RBP5.95□□□□□ -1.46
CCDC54-201ENST00000261058 A0A1B0GTL3 188 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 TSPAN6O43657 245 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 NRP2O60462 931 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 OSMP13725 252 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 LARP4Q71RC2 724 aaKnown RBP eCLIP5.94□□□□□ -1.46
CCDC54-201ENST00000261058 ADGRG2Q8IZP9 1017 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 KLHL36Q8N4N3 616 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 TXNDC5Q8NBS9 432 aaKnown RBP5.94□□□□□ -1.46
CCDC54-201ENST00000261058 NUP88Q99567 741 aaPredicted RBP5.94□□□□□ -1.46
CCDC54-201ENST00000261058 TUBD1Q9UJT1 453 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 USP18Q9UMW8 372 aa5.94□□□□□ -1.46
CCDC54-201ENST00000261058 LUC7L2Q9Y383 392 aaKnown RBP5.94□□□□□ -1.46
CCDC54-201ENST00000261058 SNUPNO95149 360 aaKnown RBP5.93□□□□□ -1.46
CCDC54-201ENST00000261058 SCGB1D2O95969 90 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 HMGCRP04035 888 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 C8AP07357 584 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 C5AR1P21730 350 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 CSF2RBP32927 897 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 PPP2R5AQ15172 486 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 LRRC41Q15345 812 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 ADRM1Q16186 407 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 IFNL2Q8IZJ0 200 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 WDR92Q96MX6 357 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 TMEM168Q9H0V1 697 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 LUC7LQ9NQ29 371 aaKnown RBP5.93□□□□□ -1.46
CCDC54-201ENST00000261058 CHPF2Q9P2E5 772 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 CDC42EP3Q9UKI2 254 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 SYNPO2Q9UMS6 1093 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 INVSQ9Y283 1065 aa5.93□□□□□ -1.46
CCDC54-201ENST00000261058 A0A1W2PR48 441 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 XPOTO43592 962 aaKnown RBP5.92□□□□□ -1.46
CCDC54-201ENST00000261058 TMEM127O75204 238 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 ZSCAN20P17040 1043 aaPredicted RBP5.92□□□□□ -1.46
CCDC54-201ENST00000261058 WASP42768 502 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 STAT5BP51692 787 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 KCNQ1P51787 676 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 PKN1Q16512 942 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 EFCAB2Q5VUJ9 269 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 TCERG1LQ5VWI1 586 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 NXNQ6DKJ4 435 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 PNMA8AQ86V59 439 aaPredicted RBP5.92□□□□□ -1.46
CCDC54-201ENST00000261058 C1QL4Q86Z23 238 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 GLB1L2Q8IW92 636 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 PAWRQ96IZ0 340 aaKnown RBP5.92□□□□□ -1.46
CCDC54-201ENST00000261058 CARD11Q9BXL7 1154 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 TCEAL9Q9UHQ7 104 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 MAGEL2Q9UJ55 1249 aa5.92□□□□□ -1.46
CCDC54-201ENST00000261058 ZNF180Q9UJW8 692 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms