RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PPP1R36Q96LQ0 422 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 SPON2Q9BUD6 331 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 TNNQ9UQP3 1299 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 TNPO2O14787 897 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 TADA2AO75478 443 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 S100A9P06702 114 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 EIF3BP55884 814 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 MTERF3Q96E29 417 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 RIMS2Q9UQ26 1411 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 SASH1O94885 1247 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 GYS1P13807 737 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 HOXC9P31274 260 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 RABGAP1LQ5R372 815 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 TEDDM1Q5T9Z0 273 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 FAM133AQ8N9E0 248 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 USP17L3A6NCW0 530 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 USP17L4A6NCW7 530 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 SOWAHDA6NJG2 315 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 EFCAB14O75071 495 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 MMP10P09238 476 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 RPS6P62753 249 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 MORF4L2Q15014 288 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 USP17L1Q7RTZ2 530 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 IQCA1LA6NCM1 817 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 DFFAO00273 331 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 ATP8B2P98198 1209 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 STXBP2Q15833 593 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 DARS2Q6PI48 645 aaKnown RBP11.81□□□□□ -0.52
MSH6-201ENST00000234420 DDHD1Q8NEL9 900 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 NT5C3AQ9H0P0 336 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 PKD2L2Q9NZM6 624 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 SNX14Q9Y5W7 946 aa11.81□□□□□ -0.52
MSH6-201ENST00000234420 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 IQANK1A0A1B0GTG1 560 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 LRRC53A6NM62 1247 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 KLHL18O94889 574 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 TAS2R42Q7RTR8 314 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 PASD1Q8IV76 773 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 FSD1LQ9BXM9 530 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 EXO5Q9H790 373 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 SLC25A13Q9UJS0 675 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 AURKCQ9UQB9 309 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 HSPA6P17066 643 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 AARS2Q5JTZ9 985 aaKnown RBP11.8□□□□□ -0.52
MSH6-201ENST00000234420 OR6B2Q6IFH4 312 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 ARMC6Q6NXE6 501 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 BBS2Q9BXC9 721 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 GINM1Q9NU53 330 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 SYBUQ9NX95 663 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 SEPT3Q9UH03 358 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 SUN2Q9UH99 717 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 UBA6A0AVT1 1052 aaPredicted RBP11.8□□□□□ -0.52
MSH6-201ENST00000234420 TSC22D1Q15714 1073 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 EPM2AIP1Q7L775 607 aaPredicted RBP11.8□□□□□ -0.52
MSH6-201ENST00000234420 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 SLC7A3Q8WY07 619 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 EIF2B2P49770 351 aaKnown RBP11.8□□□□□ -0.52
MSH6-201ENST00000234420 PHF21AQ96BD5 680 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 FAM227BQ96M60 508 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 EPAS1Q99814 870 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 M0R3G1 203 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 SLC9A1P19634 815 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 CRKLP46109 303 aaKnown RBP11.8□□□□□ -0.52
MSH6-201ENST00000234420 ADCK5Q3MIX3 580 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 KRT73Q86Y46 540 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
MSH6-201ENST00000234420 MTA3Q9BTC8 594 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 RAVER2Q9HCJ3 691 aaKnown RBP11.8□□□□□ -0.52
MSH6-201ENST00000234420 CASS4Q9NQ75 786 aa11.8□□□□□ -0.52
MSH6-201ENST00000234420 RASA4BC9J798 803 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 RASA4O43374 803 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 CELF2O95319 508 aaKnown RBP11.79□□□□□ -0.52
MSH6-201ENST00000234420 MDH1BQ5I0G3 518 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 LRRC8EQ6NSJ5 796 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 CACUL1Q86Y37 369 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 STX19Q8N4C7 294 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 CAND2O75155 1236 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 MYL7Q01449 175 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 GRIN1Q05586 938 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 PATL1Q86TB9 770 aaKnown RBP11.79□□□□□ -0.52
MSH6-201ENST00000234420 OR6J1Q8NGC5 347 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 CYGBQ8WWM9 190 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 RAD21L1Q9H4I0 556 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 UBE4BO95155 1302 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 ATP6V1B1P15313 513 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
MSH6-201ENST00000234420 APLFQ8IW19 511 aaPredicted RBP11.79□□□□□ -0.52
MSH6-201ENST00000234420 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 SPACA7Q96KW9 195 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 TEX12Q9BXU0 123 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 SIK2Q9H0K1 926 aa11.79□□□□□ -0.52
MSH6-201ENST00000234420 FOSP01100 380 aaPredicted RBP11.79□□□□□ -0.52
MSH6-201ENST00000234420 LPIN2Q92539 896 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms