RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 COPEO14579 308 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 RPS6KA4O75676 772 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 ARHGEF1Q92888 912 aaKnown RBP14.13□□□□□ -0.15
COL1A1-201ENST00000225964 CASS4Q9NQ75 786 aa14.13□□□□□ -0.15
COL1A1-201ENST00000225964 LBHD1Q9BQE6 289 aaPredicted RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 MRPL4Q9BYD3 311 aaKnown RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 STRIP2Q9ULQ0 834 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 ZBED6P86452 979 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 NRBF2Q96F24 287 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 SRPK1Q96SB4 655 aaKnown RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 EIF2AQ9BY44 585 aaKnown RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 VPS11Q9H270 941 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 ANGPTL2Q9UKU9 493 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 POTEMA6NI47 508 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 KCNJ6P48051 423 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 ARL4CP56559 192 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 CYFIP1Q7L576 1253 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 PGBD3Q8N328 593 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 LINC00301Q8NCQ3 95 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 RBM41Q96IZ5 413 aaKnown RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 TBC1D22BQ9NU19 505 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 CALB1P05937 261 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 MCAMP43121 646 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 COPS2P61201 443 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 NUDT18Q6ZVK8 323 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 RHOT2Q8IXI1 618 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 SLC26A7Q8TE54 656 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 IPO5O00410 1097 aaKnown RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 NEDD4P46934 1319 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 TMPRSS15P98073 1019 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 SPP2Q13103 211 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 RCSD1Q6JBY9 416 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 RNF135Q8IUD6 432 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 TMEM35BQ8NCS4 154 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 NEK9Q8TD19 979 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 FBXO41Q8TF61 875 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 RABGGTAQ92696 567 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 CNOT10Q9H9A5 744 aaKnown RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L22D6RA61 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L17D6RBQ6 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L19D6RCP7 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L20D6RJB6 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 IFNAR1P17181 557 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L24Q0WX57 530 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 NNTQ13423 1086 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 ZC3H12BQ5HYM0 836 aaKnown RBP14.12□□□□□ -0.15
COL1A1-201ENST00000225964 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 ACAD11Q709F0 780 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 KLHL29Q96CT2 875 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 SIK2Q9H0K1 926 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 PCSK1NQ9UHG2 260 aa14.12□□□□□ -0.15
COL1A1-201ENST00000225964 KBTBD13C9JR72 458 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 PTPN12Q05209 780 aaKnown RBP14.11□□□□□ -0.15
COL1A1-201ENST00000225964 KRT39Q6A163 491 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 RAD54LQ92698 747 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 CPVLQ9H3G5 476 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 RPAP3Q9H6T3 665 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-201ENST00000225964 ELP3Q9H9T3 547 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 CEP170Q5SW79 1584 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 NEO1Q92859 1461 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 COL15A1P39059 1388 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 NDUFA10O95299 355 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 FGGP02679 453 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 BTBD8Q5XKL5 378 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 RAB42Q8N4Z0 105 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 HIPK4Q8NE63 616 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 CYTH2Q99418 400 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 POLD4Q9HCU8 107 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 ASMTLO95671 621 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 SYF2O95926 243 aaKnown RBP14.11□□□□□ -0.15
COL1A1-201ENST00000225964 GNA15P30679 374 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 PLEKHF1Q96S99 279 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 ATP7BP35670 1465 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 A8MXQ7 604 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 SRGAP2O75044 1071 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-201ENST00000225964 BRIP1Q9BX63 1249 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 CYP26B1Q9NR63 512 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 NR3C1P04150 777 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 SMARCA1P28370 1054 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 KRT76Q01546 638 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 TTLL11Q8NHH1 800 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 RAPGEF5Q92565 580 aa14.11□□□□□ -0.15
COL1A1-201ENST00000225964 PEX19P40855 299 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 EFHC2Q5JST6 749 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 UNC13DQ70J99 1090 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 SPATA2LQ8IUW3 424 aaPredicted RBP14.1□□□□□ -0.15
COL1A1-201ENST00000225964 STAP1Q9ULZ2 295 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 KPNA7A9QM74 516 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 NMT2O60551 498 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 PALMO75781 387 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 C6orf118Q5T5N4 469 aa14.1□□□□□ -0.15
COL1A1-201ENST00000225964 ANKRD40Q6AI12 368 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms